RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 ZBTB41Q5SVQ8 909 aa12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 LARP1BQ659C4 914 aaKnown RBP12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 ARL6IP4Q66PJ3 421 aaKnown RBP12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 CWF19L1Q69YN2 538 aaKnown RBP12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 SPIRE2Q8WWL2 714 aa12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 REEP2Q9BRK0 252 aa12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 NTPCRQ9BSD7 190 aaKnown RBP12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 CCDC94Q9BW85 323 aaPredicted RBP12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 UPF2Q9HAU5 1272 aaKnown RBP12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 ZDHHC7Q9NXF8 308 aa12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
KLHDC4-209ENST00000562872 COL4A3Q01955 1670 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 PI15O43692 258 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 C8AP07357 584 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 CXCL8P10145 99 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 NPR3P17342 541 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 OR1D2P34982 312 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 CREMQ03060 361 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 SPAG1Q07617 926 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 TDGQ13569 410 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 CUL4AQ13619 759 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 MCM6Q14566 821 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 SLC10A6Q3KNW5 377 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 DCLRE1AQ6PJP8 1040 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 USP49Q70CQ1 688 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 GRASPQ7Z6J2 395 aaPredicted RBP12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 SLC7A14Q8TBB6 771 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 HDAC7Q8WUI4 952 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 CDK5RAP3Q96JB5 506 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 TCHPQ9BT92 498 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 RPP25Q9BUL9 199 aaKnown RBP12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 PIDD1Q9HB75 910 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 HCFC1R1Q9NWW0 138 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 CNTN3Q9P232 1028 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 EPS15L1Q9UBC2 864 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 MTRRQ9UBK8 725 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 TUBGCP4Q9UGJ1 667 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 DUSP12Q9UNI6 340 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 RBM19Q9Y4C8 960 aaKnown RBP12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 CLIC4Q9Y696 253 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 CDY1Q9Y6F8 540 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 USP34Q70CQ2 3546 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 MYO15AQ9UKN7 3530 aa12.1□□□□□ -0.47
KLHDC4-209ENST00000562872 MTCL1Q9Y4B5 1905 aaKnown RBP12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 VPS37CA5D8V6 355 aaPredicted RBP12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 PODXLO00592 558 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 FAM189A1O60320 539 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 TOM1L1O75674 476 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 C1RP00736 705 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 KCNE1P15382 129 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 PLCG1P19174 1290 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 TNFSF9P41273 254 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 MCM2P49736 904 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 GUCY2FP51841 1108 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 YARSP54577 528 aaKnown RBP12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 PTPN5P54829 565 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 NCKAP1LP55160 1127 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 ELAVL2Q12926 359 aaKnown RBP12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 RAB33AQ14088 237 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 NOLC1Q14978 699 aaKnown RBP eCLIP12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 SF3A1Q15459 793 aaKnown RBP12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 SPECC1Q5M775 1068 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 AXDND1Q5T1B0 1012 aaPredicted RBP12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 POTEHQ6S545 545 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 GPBP1Q86WP2 473 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 SIX5Q8N196 739 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 ITFG1Q8TB96 612 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 ACAP3Q96P50 834 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 TIPINQ9BVW5 301 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 IKZF4Q9H2S9 585 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 C17orf75Q9HAS0 396 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 TOPORSQ9NS56 1045 aaPredicted RBP12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 DPP7Q9UHL4 492 aa12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.09□□□□□ -0.47
KLHDC4-209ENST00000562872 CACNA1HO95180 2353 aa12.08□□□□□ -0.47
KLHDC4-209ENST00000562872 KRBA1A5PL33 1030 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 TISP43B9A030 160 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 H0Y858 1186 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 NRG2O14511 850 aaPredicted RBP12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 CFHP08603 1231 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 LAMP2P13473 410 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 FSHRP23945 695 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 ROR1Q01973 937 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 MCL1Q07820 350 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 STRN3Q13033 797 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 HTR4Q13639 388 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 PTPAQ15257 358 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 PPM1LQ5SGD2 360 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 VARS2Q5ST30 1063 aaKnown RBP12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 LIN9Q5TKA1 542 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 ASTLQ6HA08 431 aaPredicted RBP12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 SLC39A4Q6P5W5 647 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 ELMSAN1Q6PJG2 1045 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 CYP26C1Q6V0L0 522 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 APBB1IPQ7Z5R6 666 aaPredicted RBP12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 SLC44A3Q8N4M1 653 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 FLCNQ8NFG4 579 aa12.08□□□□□ -0.48
KLHDC4-209ENST00000562872 RAD54LQ92698 747 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms