RNA–Protein interactions for RNA: ENST00000562589.5

E4F1-202, Transcript of E4F transcription factor 1, humanhuman

TSL 5

Gene E4F1, Length 817 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-202ENST00000562589 UPP1Q16831 310 aa27.39■■□□□ 1.98
E4F1-202ENST00000562589 USP41Q3LFD5 358 aa27.39■■□□□ 1.98
E4F1-202ENST00000562589 DCLRE1AQ6PJP8 1040 aa27.39■■□□□ 1.98
E4F1-202ENST00000562589 TMEM87AQ8NBN3 555 aa27.39■■□□□ 1.98
E4F1-202ENST00000562589 EMILIN2Q9BXX0 1053 aa27.39■■□□□ 1.98
E4F1-202ENST00000562589 FGFBP2Q9BYJ0 223 aa27.39■■□□□ 1.98
E4F1-202ENST00000562589 FAM50BQ9Y247 325 aa27.39■■□□□ 1.98
E4F1-202ENST00000562589 NCOR1O75376 2440 aa27.39■■□□□ 1.97
E4F1-202ENST00000562589 SF3B1O75533 1304 aaKnown RBP eCLIP27.39■■□□□ 1.971e-8■■■■■ 29.3
E4F1-202ENST00000562589 FAM237AA0A1B0GTK4 181 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 TTC26A0AVF1 554 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 TISP43B9A030 160 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 TMEM189-UBE2V1I3L0A0 370 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 ACTN4O43707 911 aaKnown RBP27.38■■□□□ 1.97
E4F1-202ENST00000562589 TNFSF9P41273 254 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 CLCNKBP51801 687 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 SMAD4Q13485 552 aaKnown RBP27.38■■□□□ 1.97
E4F1-202ENST00000562589 CLUL1Q15846 466 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 ZBTB41Q5SVQ8 909 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 LLGL2Q6P1M3 1020 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 CEP57L1Q8IYX8 460 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 DDX27Q96GQ7 796 aaKnown RBP27.38■■□□□ 1.97
E4F1-202ENST00000562589 KLHL5Q96PQ7 755 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 UHRF1Q96T88 793 aaPredicted RBP27.38■■□□□ 1.97
E4F1-202ENST00000562589 USP25Q9UHP3 1055 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 HCFC2Q9Y5Z7 792 aa27.38■■□□□ 1.97
E4F1-202ENST00000562589 A0A1W2PQ27 194 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 A0A1W2PQ64 194 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 A0A1W2PQD8 194 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 ADRB2P07550 413 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 CNPP09543 421 aaKnown RBP27.37■■□□□ 1.97
E4F1-202ENST00000562589 ENOX2Q16206 610 aaKnown RBP27.37■■□□□ 1.97
E4F1-202ENST00000562589 KIAA1841Q6NSI8 718 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 PPFIBP1Q86W92 1011 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 SMRP1Q8NCR6 262 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 HASPINQ8TF76 798 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 CASP10Q92851 521 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 IKZF4Q9H2S9 585 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 GOLGA2P5Q9HBQ8 144 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 RXFP1Q9HBX9 757 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 SERTAD1Q9UHV2 236 aa27.37■■□□□ 1.97
E4F1-202ENST00000562589 CPSF3Q9UKF6 684 aaKnown RBP27.37■■□□□ 1.97
E4F1-202ENST00000562589 PDCD11Q14690 1871 aaKnown RBP27.36■■□□□ 1.97
E4F1-202ENST00000562589 C2CD2LO14523 706 aa27.36■■□□□ 1.97
E4F1-202ENST00000562589 MBTPS2O43462 519 aa27.36■■□□□ 1.97
E4F1-202ENST00000562589 IL9P15248 144 aa27.36■■□□□ 1.97
E4F1-202ENST00000562589 ADSSP30520 456 aa27.36■■□□□ 1.97
E4F1-202ENST00000562589 ELAVL2Q12926 359 aaKnown RBP27.36■■□□□ 1.97
E4F1-202ENST00000562589 POSTNQ15063 836 aa27.36■■□□□ 1.97
E4F1-202ENST00000562589 ANKRD54Q6NXT1 300 aa27.36■■□□□ 1.97
E4F1-202ENST00000562589 STXBP4Q6ZWJ1 553 aa27.36■■□□□ 1.97
E4F1-202ENST00000562589 UNC13DQ70J99 1090 aa27.36■■□□□ 1.97
E4F1-202ENST00000562589 SLC22A17Q8WUG5 538 aa27.36■■□□□ 1.97
E4F1-202ENST00000562589 C18orf25Q96B23 403 aaPredicted RBP27.36■■□□□ 1.97
E4F1-202ENST00000562589 TSPAN18Q96SJ8 248 aa27.36■■□□□ 1.97
E4F1-202ENST00000562589 RPF1Q9H9Y2 349 aaKnown RBP27.36■■□□□ 1.97
E4F1-202ENST00000562589 AGO2Q9UKV8 859 aaKnown RBP27.36■■□□□ 1.97
E4F1-202ENST00000562589 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.36■■□□□ 1.97
E4F1-202ENST00000562589 PVALEFA0A1B0GWK0 134 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 B3GAT3O94766 335 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 HOXB8P17481 243 aaPredicted RBP27.35■■□□□ 1.97
E4F1-202ENST00000562589 RPL9P32969 192 aaKnown RBP27.35■■□□□ 1.97
E4F1-202ENST00000562589 AFMP43652 599 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 PPP2R3AQ06190 1150 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 EHHADHQ08426 723 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 SMAD2Q15796 467 aaKnown RBP27.35■■□□□ 1.97
E4F1-202ENST00000562589 CD300LGQ6UXG3 332 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 HPS3Q969F9 1004 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 PAGE5Q96GU1 130 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 B3GALT6Q96L58 329 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 BLZF1Q9H2G9 400 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 TMEM206Q9H813 350 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 GDPD2Q9HCC8 539 aa27.35■■□□□ 1.97
E4F1-202ENST00000562589 LACTBL1A8MY62 500 aa27.34■■□□□ 1.97
E4F1-202ENST00000562589 PRPF6O94906 941 aaKnown RBP27.34■■□□□ 1.97
E4F1-202ENST00000562589 IGFBP6P24592 240 aaPredicted RBP27.34■■□□□ 1.97
E4F1-202ENST00000562589 CASP1P29466 404 aa27.34■■□□□ 1.97
E4F1-202ENST00000562589 POU5F1Q01860 360 aaKnown RBP27.34■■□□□ 1.97
E4F1-202ENST00000562589 CUL4BQ13620 913 aa27.34■■□□□ 1.97
E4F1-202ENST00000562589 FAM171A1Q5VUB5 890 aa27.34■■□□□ 1.97
E4F1-202ENST00000562589 CD302Q8IX05 232 aa27.34■■□□□ 1.97
E4F1-202ENST00000562589 SYCP3Q8IZU3 236 aa27.34■■□□□ 1.97
E4F1-202ENST00000562589 POMGNT1Q8WZA1 660 aa27.34■■□□□ 1.97
E4F1-202ENST00000562589 NECAB3Q96P71 396 aaPredicted RBP27.34■■□□□ 1.97
E4F1-202ENST00000562589 TTPALQ9BTX7 342 aa27.34■■□□□ 1.97
E4F1-202ENST00000562589 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.34■■□□□ 1.97
E4F1-202ENST00000562589 PODXLO00592 558 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 TEX28O15482 410 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 KLRC2P26717 231 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 SYKP43405 635 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 CLCN4P51793 760 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 NDUFA8P51970 172 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 ZBTB6Q15916 424 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 RTP2Q5QGT7 225 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 FAM26FQ5R3K3 315 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 SYCE2Q6PIF2 218 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 EPM2AIP1Q7L775 607 aaPredicted RBP27.33■■□□□ 1.97
E4F1-202ENST00000562589 GRAMD1CQ8IYS0 662 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 C3orf58Q8NDZ4 430 aa27.33■■□□□ 1.97
E4F1-202ENST00000562589 GLIS3Q8NEA6 775 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms