RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 NT5C3AQ9H0P0 336 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 FANCMQ8IYD8 2048 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 VWA8A3KMH1 1905 aa27.73■■■□□ 2.03
NME3-202ENST00000561637 MED19A0JLT2 244 aaPredicted RBP27.73■■■□□ 2.03
NME3-202ENST00000561637 PLS3P13797 630 aa27.73■■■□□ 2.03
NME3-202ENST00000561637 PROZP22891 400 aa27.73■■■□□ 2.03
NME3-202ENST00000561637 SOX4Q06945 474 aaPredicted RBP27.73■■■□□ 2.03
NME3-202ENST00000561637 RESTQ13127 1097 aa27.73■■■□□ 2.03
NME3-202ENST00000561637 SEZ6Q53EL9 994 aa27.73■■■□□ 2.03
NME3-202ENST00000561637 SPECC1Q5M775 1068 aa27.73■■■□□ 2.03
NME3-202ENST00000561637 CD300LGQ6UXG3 332 aa27.73■■■□□ 2.03
NME3-202ENST00000561637 RSAD2Q8WXG1 361 aa27.73■■■□□ 2.03
NME3-202ENST00000561637 SF3B1O75533 1304 aaKnown RBP eCLIP27.72■■■□□ 2.03
NME3-202ENST00000561637 KRBA1A5PL33 1030 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 ADAM12O43184 909 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 GLUD1P00367 558 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 MAPTP10636 758 aaKnown RBP27.72■■■□□ 2.03
NME3-202ENST00000561637 PLCG1P19174 1290 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 SYT1P21579 422 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 GRM5P41594 1212 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 MCM6Q14566 821 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 FAM171A1Q5VUB5 890 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 GPBP1Q86WP2 473 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 C3orf58Q8NDZ4 430 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 KCNG4Q8TDN1 519 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 ZMAT2Q96NC0 199 aaKnown RBP27.72■■■□□ 2.03
NME3-202ENST00000561637 R4GN57 208 aa27.72■■■□□ 2.03
NME3-202ENST00000561637 I3L4J1 428 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 TGM5O43548 720 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 CFHP08603 1231 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 UBA7P41226 1012 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 PTPAQ15257 358 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 CEP57Q86XR8 500 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 SPIRE2Q8WWL2 714 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 REEP2Q9BRK0 252 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 TIPINQ9BVW5 301 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 HAPLN2Q9GZV7 340 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 SSX2IPQ9Y2D8 614 aa27.71■■■□□ 2.03
NME3-202ENST00000561637 SMIM28A0A1B0GU29 152 aa27.7■■■□□ 2.02
NME3-202ENST00000561637 MARCKSP29966 332 aaPredicted RBP27.7■■■□□ 2.02
NME3-202ENST00000561637 CLCNKBP51801 687 aa27.7■■■□□ 2.02
NME3-202ENST00000561637 ZNF707Q96C28 371 aaPredicted RBP27.7■■■□□ 2.02
NME3-202ENST00000561637 AK8Q96MA6 479 aa27.7■■■□□ 2.02
NME3-202ENST00000561637 NTPCRQ9BSD7 190 aaKnown RBP27.7■■■□□ 2.02
NME3-202ENST00000561637 ANKFY1Q9P2R3 1169 aa27.7■■■□□ 2.02
NME3-202ENST00000561637 RBM19Q9Y4C8 960 aaKnown RBP27.7■■■□□ 2.02
NME3-202ENST00000561637 STK25O00506 426 aa27.69■■■□□ 2.02
NME3-202ENST00000561637 LMNAP02545 664 aaKnown RBP27.69■■■□□ 2.02
NME3-202ENST00000561637 MPZL3Q6UWV2 235 aa27.69■■■□□ 2.02
NME3-202ENST00000561637 ALKAL1Q6UXT8 129 aa27.69■■■□□ 2.02
NME3-202ENST00000561637 KIAA2013Q8IYS2 634 aa27.69■■■□□ 2.02
NME3-202ENST00000561637 LNX1Q8TBB1 728 aaPredicted RBP27.69■■■□□ 2.02
NME3-202ENST00000561637 EPSTI1Q96J88 318 aa27.69■■■□□ 2.02
NME3-202ENST00000561637 TCHPQ9BT92 498 aa27.69■■■□□ 2.02
NME3-202ENST00000561637 TTPALQ9BTX7 342 aa27.69■■■□□ 2.02
NME3-202ENST00000561637 CCDC94Q9BW85 323 aaPredicted RBP27.69■■■□□ 2.02
NME3-202ENST00000561637 C17orf75Q9HAS0 396 aa27.69■■■□□ 2.02
NME3-202ENST00000561637 IGSF9Q9P2J2 1179 aa27.69■■■□□ 2.02
NME3-202ENST00000561637 CCDC195A0A1B0GUA6 201 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 MCF2P10911 925 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 CEBPZQ03701 1054 aaKnown RBP27.68■■■□□ 2.02
NME3-202ENST00000561637 XKR4Q5GH76 650 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 LILRA6Q6PI73 481 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 C15orf39Q6ZRI6 1047 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 RAD54LQ92698 747 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 C18orf25Q96B23 403 aaPredicted RBP27.68■■■□□ 2.02
NME3-202ENST00000561637 CALML4Q96GE6 196 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 CLSTN3Q9BQT9 956 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 FNIP2Q9P278 1114 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 WNT16Q9UBV4 365 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 MTMR6Q9Y217 621 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 MTCL1Q9Y4B5 1905 aaKnown RBP27.68■■■□□ 2.02
NME3-202ENST00000561637 DOCK6Q96HP0 2047 aa27.68■■■□□ 2.02
NME3-202ENST00000561637 LONP1P36776 959 aaKnown RBP27.67■■■□□ 2.02
NME3-202ENST00000561637 BRCC3P46736 316 aa27.67■■■□□ 2.02
NME3-202ENST00000561637 PSMD5Q16401 504 aa27.67■■■□□ 2.02
NME3-202ENST00000561637 CMASQ8NFW8 434 aaPredicted RBP27.67■■■□□ 2.02
NME3-202ENST00000561637 PIK3R5Q8WYR1 880 aa27.67■■■□□ 2.02
NME3-202ENST00000561637 CLIC6Q96NY7 704 aa27.67■■■□□ 2.02
NME3-202ENST00000561637 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.67■■■□□ 2.02
NME3-202ENST00000561637 FBXO2Q9UK22 296 aaPredicted RBP27.67■■■□□ 2.02
NME3-202ENST00000561637 CA14Q9ULX7 337 aa27.67■■■□□ 2.02
NME3-202ENST00000561637 OTOGLQ3ZCN5 2332 aa27.66■■■□□ 2.02
NME3-202ENST00000561637 CACNA1IQ9P0X4 2223 aa27.66■■■□□ 2.02
NME3-202ENST00000561637 B3GAT3O94766 335 aa27.66■■■□□ 2.02
NME3-202ENST00000561637 BMP15O95972 392 aa27.66■■■□□ 2.02
NME3-202ENST00000561637 NCKAP1LP55160 1127 aa27.66■■■□□ 2.02
NME3-202ENST00000561637 STRN3Q13033 797 aa27.66■■■□□ 2.02
NME3-202ENST00000561637 UPP1Q16831 310 aa27.66■■■□□ 2.02
NME3-202ENST00000561637 RSPO2Q6UXX9 243 aaPredicted RBP27.66■■■□□ 2.02
NME3-202ENST00000561637 SEMA4AQ9H3S1 761 aa27.66■■■□□ 2.02
NME3-202ENST00000561637 CITO14578 2027 aa27.66■■■□□ 2.02
NME3-202ENST00000561637 PDCP20941 246 aa27.65■■■□□ 2.02
NME3-202ENST00000561637 TKTP29401 623 aaKnown RBP27.65■■■□□ 2.02
NME3-202ENST00000561637 GBP2P32456 591 aaPredicted RBP27.65■■■□□ 2.02
NME3-202ENST00000561637 YARSP54577 528 aaKnown RBP27.65■■■□□ 2.02
NME3-202ENST00000561637 NOLC1Q14978 699 aaKnown RBP eCLIP27.65■■■□□ 2.02
NME3-202ENST00000561637 DGLUCYQ7Z3D6 616 aa27.65■■■□□ 2.02
NME3-202ENST00000561637 APBB1IPQ7Z5R6 666 aaPredicted RBP27.65■■■□□ 2.02
NME3-202ENST00000561637 GPR65Q8IYL9 337 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms