RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 PKD2L2Q9NZM6 624 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 PRR36Q9H6K5 1346 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 APOA1P02647 267 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 KRT7P08729 469 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 CDH6P55285 790 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 RTKN2Q8IZC4 609 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.76□□□□□ -0.693e-6■■■■□ 23.5
GTF3C1-202ENST00000561623 PBXIP1Q96AQ6 731 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 ERP44Q9BS26 406 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 DCP1AQ9NPI6 582 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 PPP1R3GB7ZBB8 358 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 PJA2O43164 708 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 SLC9A1P19634 815 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 SESN2P58004 480 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 SPATA17Q96L03 361 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 PHF20Q9BVI0 1012 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 SENP2Q9HC62 589 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 C20orf96Q9NUD7 363 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 POLR1AO95602 1720 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 LOC100653049A0A140TA62 436 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 MAGEA13PA6NCF6 341 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 FAM196BA6NMK8 535 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 KRT34O76011 436 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 SLC44A4Q53GD3 710 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 HIC2Q96JB3 615 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 SARS2Q9NP81 518 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 OLFML3Q9NRN5 406 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 XPO7Q9UIA9 1087 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 CEP170Q5SW79 1584 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 ASAP2O43150 1006 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 ATP9BO43861 1147 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 ATP6V1G2O95670 118 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 VCAM1P19320 739 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 RCAN1P53805 252 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 DSG1Q02413 1049 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 PTK7Q13308 1070 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 SURF1Q15526 300 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 WDR93Q6P2C0 686 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 DHX36Q9H2U1 1008 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 SAMD9Q5K651 1589 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 PDS5AQ29RF7 1337 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 CPDO75976 1380 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 KCNN4O15554 427 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 DEAF1O75398 565 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 RHOBTB3O94955 611 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 UPP2O95045 317 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 LDHAP00338 332 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 KRT8P05787 483 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 ABCD1P33897 745 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 MTMR1Q13613 665 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 TAF1CQ15572 869 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 RFWD2Q8NHY2 731 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 KCNB2Q92953 911 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 MANSC1Q9H8J5 431 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 PARVAQ9NVD7 372 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 HACL1Q9UJ83 578 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 MAGEA4P43358 317 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 LAMB3Q13751 1172 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 IMPG1Q17R60 797 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 METTL23Q86XA0 190 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 EIF2AK1Q9BQI3 630 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 DHX35Q9H5Z1 703 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 ATP6V0A4Q9HBG4 840 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 ZFATQ9P243 1243 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 MTO1Q9Y2Z2 717 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 LAMC1P11047 1609 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 COMTP21964 271 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 SDC4P31431 198 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 FAM102AQ5T9C2 384 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 SYDE1Q6ZW31 735 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 SZRD1Q7Z422 152 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 ZNF668Q96K58 619 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 TMBIM4Q9HC24 238 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 PI4KBQ9UBF8 816 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 RAB23Q9ULC3 237 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 RBBP7Q16576 425 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 ADGRF4Q8IZF3 695 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.75□□□□□ -0.696e-7■■■□□ 15.8
GTF3C1-202ENST00000561623 SRP68Q9UHB9 627 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 SLC12A6Q9UHW9 1150 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 FBXL21Q9UKT6 434 aa10.75□□□□□ -0.69
GTF3C1-202ENST00000561623 KRT75O95678 551 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 SNX19Q92543 992 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 CLMNQ96JQ2 1002 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 CCDC78A2IDD5 438 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 MYMKA6NI61 221 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 SASH3O75995 380 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 SERPINB10P48595 397 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 GJB7Q6PEY0 223 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 IFNLR1Q8IU57 520 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 CCDC134Q9H6E4 229 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 PDP2Q9P2J9 529 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 UTYO14607 1347 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 NCOA3Q9Y6Q9 1424 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 PLOD1Q02809 727 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ZCWPW2Q504Y3 356 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 CDKL3Q8IVW4 592 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ANKS1AQ92625 1134 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 LXNQ9BS40 222 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms