RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 CACNB1Q02641 598 aaPredicted RBP20.91■□□□□ 0.94
KNSTRN-208ENST00000559604 CUL4AQ13619 759 aa20.91■□□□□ 0.94
KNSTRN-208ENST00000559604 STAMQ92783 540 aa20.91■□□□□ 0.94
KNSTRN-208ENST00000559604 MYADMQ96S97 322 aa20.91■□□□□ 0.94
KNSTRN-208ENST00000559604 PIDD1Q9HB75 910 aa20.91■□□□□ 0.94
KNSTRN-208ENST00000559604 KCNG1Q9UIX4 513 aa20.91■□□□□ 0.94
KNSTRN-208ENST00000559604 CACNA1HO95180 2353 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 SLC26A4O43511 780 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 HARSP12081 509 aaKnown RBP20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 KCNE1P15382 129 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 GBP2P32456 591 aaPredicted RBP20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 SMTNP53814 917 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 GRIN1Q05586 938 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 TCF15Q12870 199 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 STRN3Q13033 797 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 TDGQ13569 410 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 PDXDC1Q6P996 788 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 BRAPQ7Z569 592 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 ALYREFQ86V81 257 aaKnown RBP20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 ACAP3Q96P50 834 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 EPS15L1Q9UBC2 864 aa20.9■□□□□ 0.94
KNSTRN-208ENST00000559604 I3L4J1 428 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 TOM1L1O75674 476 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 TKTP29401 623 aaKnown RBP20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 UBA7P41226 1012 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 BRCC3P46736 316 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 RAB33AQ14088 237 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 RSPO2Q6UXX9 243 aaPredicted RBP20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 PRRX2Q99811 253 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 BLOC1S4Q9NUP1 217 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 SLC38A7Q9NVC3 462 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 CNTN3Q9P232 1028 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 IGSF9Q9P2J2 1179 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 ANKFY1Q9P2R3 1169 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 MTRRQ9UBK8 725 aa20.89■□□□□ 0.93
KNSTRN-208ENST00000559604 BMP15O95972 392 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 OR1D2P34982 312 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 PTPN5P54829 565 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 NCKAP1LP55160 1127 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 NOLC1Q14978 699 aaKnown RBP eCLIP20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 SF3A1Q15459 793 aaKnown RBP20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 SEZ6Q53EL9 994 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 LIN9Q5TKA1 542 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 ZPBP2Q6X784 338 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 RSAD2Q8WXG1 361 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 CALML4Q96GE6 196 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 DDX27Q96GQ7 796 aaKnown RBP20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 REEP2Q9BRK0 252 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 LARSQ9P2J5 1176 aaKnown RBP20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 DUSP12Q9UNI6 340 aa20.88■□□□□ 0.93
KNSTRN-208ENST00000559604 VPS37CA5D8V6 355 aaPredicted RBP20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 PODXLO00592 558 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 TRAPPC3O43617 180 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 C8AP07357 584 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 HNRNPA1P09651 372 aaKnown RBP eCLIP20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 LONP1P36776 959 aaKnown RBP20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 SLC10A6Q3KNW5 377 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 GPBP1Q86WP2 473 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 KCNN1Q92952 543 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 C18orf25Q96B23 403 aaPredicted RBP20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 HAPLN2Q9GZV7 340 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 ODF2LQ9ULJ1 636 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 BACE2Q9Y5Z0 518 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 CDY1Q9Y6F8 540 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 NOTCH4Q99466 2003 aa20.87■□□□□ 0.93
KNSTRN-208ENST00000559604 NARSO43776 548 aaKnown RBP20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 LAMP2P13473 410 aa20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 PLCG1P19174 1290 aa20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 HOXA9P31269 272 aa20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 MCL1Q07820 350 aa20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 DHX8Q14562 1220 aaKnown RBP20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 KARSQ15046 597 aaKnown RBP20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 PPM1LQ5SGD2 360 aa20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 GET4Q7L5D6 327 aaPredicted RBP20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 HAUS6Q7Z4H7 955 aa20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 TMEM105Q8N8V8 129 aa20.86■□□□□ 0.93
KNSTRN-208ENST00000559604 CLDN3O15551 220 aa20.85■□□□□ 0.93
KNSTRN-208ENST00000559604 MRE11P49959 708 aa20.85■□□□□ 0.93
KNSTRN-208ENST00000559604 NTHL1P78549 312 aa20.85■□□□□ 0.93
KNSTRN-208ENST00000559604 MCM6Q14566 821 aa20.85■□□□□ 0.93
KNSTRN-208ENST00000559604 AXDND1Q5T1B0 1012 aaPredicted RBP20.85■□□□□ 0.93
KNSTRN-208ENST00000559604 ANKS3Q6ZW76 656 aa20.85■□□□□ 0.93
KNSTRN-208ENST00000559604 GRASPQ7Z6J2 395 aaPredicted RBP20.85■□□□□ 0.93
KNSTRN-208ENST00000559604 SLC7A14Q8TBB6 771 aa20.85■□□□□ 0.93
KNSTRN-208ENST00000559604 RAD54LQ92698 747 aa20.85■□□□□ 0.93
KNSTRN-208ENST00000559604 PHOX2BQ99453 314 aa20.85■□□□□ 0.93
KNSTRN-208ENST00000559604 H0YCG3 227 aa20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 CCL16O15467 120 aa20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 FSHRP23945 695 aa20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 RPL9P32969 192 aaKnown RBP20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 ZNF131P52739 623 aa20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 NUBP1P53384 320 aa20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 PTPAQ15257 358 aa20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 UVSSAQ2YD98 709 aa20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 VARS2Q5ST30 1063 aaKnown RBP20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 ASTLQ6HA08 431 aaPredicted RBP20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 SLC44A3Q8N4M1 653 aa20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 MYCT1Q8N699 235 aa20.84■□□□□ 0.93
KNSTRN-208ENST00000559604 MFSD1Q9H3U5 465 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms