RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 BACH2Q9BYV9 841 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 IGSF9Q9P2J2 1179 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 CLUHO75153 1309 aa19.42■□□□□ 0.7
TPM1-218ENST00000559281 NPHP3-ACAD11A0A0J9YXS1 232 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 ABLIM1O14639 778 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 FAM13AO94988 1023 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 HNRNPA1P09651 372 aaKnown RBP eCLIP19.41■□□□□ 0.7
TPM1-218ENST00000559281 CACNB1Q02641 598 aaPredicted RBP19.41■□□□□ 0.7
TPM1-218ENST00000559281 TDGQ13569 410 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 KYAT1Q16773 422 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 HAUS6Q7Z4H7 955 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 FEZF2Q8TBJ5 459 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 KCNN1Q92952 543 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 ZNF707Q96C28 371 aaPredicted RBP19.41■□□□□ 0.7
TPM1-218ENST00000559281 CCSER1Q9C0I3 900 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 PLEKHA5Q9HAU0 1116 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 PARVGQ9HBI0 331 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.41■□□□□ 0.7
TPM1-218ENST00000559281 CNTN3Q9P232 1028 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 CCDC39Q9UFE4 941 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 FBXW11Q9UKB1 542 aa19.41■□□□□ 0.7
TPM1-218ENST00000559281 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.41■□□□□ 0.7
TPM1-218ENST00000559281 PODXLO00592 558 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 PLCG1P19174 1290 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 OR1D2P34982 312 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 DDIT3P35638 169 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 NCKAP1LP55160 1127 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 MCL1Q07820 350 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 RAB33AQ14088 237 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 KARSQ15046 597 aaKnown RBP19.4■□□□□ 0.7
TPM1-218ENST00000559281 UVSSAQ2YD98 709 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 PPM1LQ5SGD2 360 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 RTL10Q7L3V2 364 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 RAD54LQ92698 747 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 NXPE3Q969Y0 559 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 REEP2Q9BRK0 252 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 KCNK12Q9HB15 430 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 GOLGA2P5Q9HBQ8 144 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 MTRRQ9UBK8 725 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 NUB1Q9Y5A7 615 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 BACE2Q9Y5Z0 518 aa19.4■□□□□ 0.7
TPM1-218ENST00000559281 TDRD15B5MCY1 1934 aaKnown RBP19.39■□□□□ 0.7
TPM1-218ENST00000559281 XYLBO75191 536 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 TBCAO75347 108 aaKnown RBP19.39■□□□□ 0.69
TPM1-218ENST00000559281 CLTAP09496 248 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 SYT1P21579 422 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 AVPR2P30518 371 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 HOXA9P31269 272 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 LIG4P49917 911 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 MCM6Q14566 821 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 LARP4BQ92615 738 aaKnown RBP19.39■□□□□ 0.69
TPM1-218ENST00000559281 ZMAT2Q96NC0 199 aaKnown RBP19.39■□□□□ 0.69
TPM1-218ENST00000559281 ZHX3Q9H4I2 956 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 BLOC1S4Q9NUP1 217 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 EPS15L1Q9UBC2 864 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 CLIC4Q9Y696 253 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 MUC6Q6W4X9 2439 aa19.39■□□□□ 0.69
TPM1-218ENST00000559281 SYN3O14994 580 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 TRAK2O60296 914 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 C8AP07357 584 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 TXLNAP40222 546 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 BRCC3P46736 316 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 ZNF131P52739 623 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 NUBP1P53384 320 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 GRIN1Q05586 938 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 SOX4Q06945 474 aaPredicted RBP19.38■□□□□ 0.69
TPM1-218ENST00000559281 SLC10A6Q3KNW5 377 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 CD300LGQ6UXG3 332 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 KRI1Q8N9T8 703 aaKnown RBP19.38■□□□□ 0.69
TPM1-218ENST00000559281 MFSD1Q9H3U5 465 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 TBX20Q9UMR3 447 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 SRPRBQ9Y5M8 271 aaKnown RBP19.38■□□□□ 0.69
TPM1-218ENST00000559281 CDY1Q9Y6F8 540 aa19.38■□□□□ 0.69
TPM1-218ENST00000559281 ZFP37Q9Y6Q3 630 aaPredicted RBP19.38■□□□□ 0.69
TPM1-218ENST00000559281 H7C4K7 107 aa19.37■□□□□ 0.69
TPM1-218ENST00000559281 K7ENM7 598 aa19.37■□□□□ 0.69
TPM1-218ENST00000559281 HNRNPDLO14979 420 aaKnown RBP19.37■□□□□ 0.69
TPM1-218ENST00000559281 ADAM12O43184 909 aa19.37■□□□□ 0.69
TPM1-218ENST00000559281 TKTP29401 623 aaKnown RBP19.37■□□□□ 0.69
TPM1-218ENST00000559281 HOXD11P31277 338 aaPredicted RBP19.37■□□□□ 0.69
TPM1-218ENST00000559281 PTPN5P54829 565 aa19.37■□□□□ 0.69
TPM1-218ENST00000559281 PTPAQ15257 358 aa19.37■□□□□ 0.69
TPM1-218ENST00000559281 AXDND1Q5T1B0 1012 aaPredicted RBP19.37■□□□□ 0.69
TPM1-218ENST00000559281 C3orf58Q8NDZ4 430 aa19.37■□□□□ 0.69
TPM1-218ENST00000559281 TSPAN18Q96SJ8 248 aa19.37■□□□□ 0.69
TPM1-218ENST00000559281 IRF2BPLQ9H1B7 796 aa19.37■□□□□ 0.69
TPM1-218ENST00000559281 ZSCAN16Q9H4T2 348 aaPredicted RBP19.37■□□□□ 0.69
TPM1-218ENST00000559281 STK17AQ9UEE5 414 aa19.37■□□□□ 0.69
TPM1-218ENST00000559281 I3L4J1 428 aa19.36■□□□□ 0.69
TPM1-218ENST00000559281 K7ELQ4 463 aaPredicted RBP19.36■□□□□ 0.69
TPM1-218ENST00000559281 XPOTO43592 962 aaKnown RBP19.36■□□□□ 0.69
TPM1-218ENST00000559281 N4BP1O75113 896 aaKnown RBP19.36■□□□□ 0.69
TPM1-218ENST00000559281 FSHRP23945 695 aa19.36■□□□□ 0.69
TPM1-218ENST00000559281 IGFBP6P24592 240 aaPredicted RBP19.36■□□□□ 0.69
TPM1-218ENST00000559281 MARCKSP29966 332 aaPredicted RBP19.36■□□□□ 0.69
TPM1-218ENST00000559281 ELF1P32519 619 aa19.36■□□□□ 0.69
TPM1-218ENST00000559281 NHLH1Q02575 133 aa19.36■□□□□ 0.69
TPM1-218ENST00000559281 RESTQ13127 1097 aa19.36■□□□□ 0.69
TPM1-218ENST00000559281 SEZ6Q53EL9 994 aa19.36■□□□□ 0.69
TPM1-218ENST00000559281 IER5LQ5T953 404 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms