RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 ANKFY1Q9P2R3 1169 aa16.54■□□□□ 0.24
SMAD6-203ENST00000558937 KCNG1Q9UIX4 513 aa16.54■□□□□ 0.24
SMAD6-203ENST00000558937 I3L4J1 428 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 MEFVO15553 781 aaPredicted RBP16.53■□□□□ 0.24
SMAD6-203ENST00000558937 N4BP1O75113 896 aaKnown RBP16.53■□□□□ 0.24
SMAD6-203ENST00000558937 TOM1L1O75674 476 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 ZMYND10O75800 440 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 PDGFBP01127 241 aaPredicted RBP16.53■□□□□ 0.24
SMAD6-203ENST00000558937 KCNE1P15382 129 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 PLCG1P19174 1290 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 PDCP20941 246 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 FGFR3P22607 806 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 LONP1P36776 959 aaKnown RBP16.53■□□□□ 0.24
SMAD6-203ENST00000558937 BRCC3P46736 316 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 VCPP55072 806 aaKnown RBP16.53■□□□□ 0.24
SMAD6-203ENST00000558937 NCKAP1LP55160 1127 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 DHX8Q14562 1220 aaKnown RBP16.53■□□□□ 0.24
SMAD6-203ENST00000558937 NOLC1Q14978 699 aaKnown RBP eCLIP16.53■□□□□ 0.24
SMAD6-203ENST00000558937 UPP1Q16831 310 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 PDXDC1Q6P996 788 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 ZPBP2Q6X784 338 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 STAMQ92783 540 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 PRKD2Q9BZL6 878 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 PIDD1Q9HB75 910 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 SLC38A7Q9NVC3 462 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 CNTN3Q9P232 1028 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 LARSQ9P2J5 1176 aaKnown RBP16.53■□□□□ 0.24
SMAD6-203ENST00000558937 ODF2LQ9ULJ1 636 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 DOCK6Q96HP0 2047 aa16.53■□□□□ 0.24
SMAD6-203ENST00000558937 TKTP29401 623 aaKnown RBP16.52■□□□□ 0.24
SMAD6-203ENST00000558937 HOXD11P31277 338 aaPredicted RBP16.52■□□□□ 0.24
SMAD6-203ENST00000558937 GBP2P32456 591 aaPredicted RBP16.52■□□□□ 0.24
SMAD6-203ENST00000558937 RESTQ13127 1097 aa16.52■□□□□ 0.24
SMAD6-203ENST00000558937 MCM6Q14566 821 aa16.52■□□□□ 0.24
SMAD6-203ENST00000558937 SEZ6Q53EL9 994 aa16.52■□□□□ 0.24
SMAD6-203ENST00000558937 PRSS33Q8NF86 280 aa16.52■□□□□ 0.24
SMAD6-203ENST00000558937 RASSF8Q8NHQ8 419 aa16.52■□□□□ 0.24
SMAD6-203ENST00000558937 RAD54LQ92698 747 aa16.52■□□□□ 0.24
SMAD6-203ENST00000558937 DDX27Q96GQ7 796 aaKnown RBP16.52■□□□□ 0.24
SMAD6-203ENST00000558937 MYADMQ96S97 322 aa16.52■□□□□ 0.24
SMAD6-203ENST00000558937 BACH2Q9BYV9 841 aa16.52■□□□□ 0.24
SMAD6-203ENST00000558937 MTRRQ9UBK8 725 aa16.52■□□□□ 0.24
SMAD6-203ENST00000558937 CLIC4Q9Y696 253 aa16.52■□□□□ 0.24
SMAD6-203ENST00000558937 H0YCG3 227 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 PODXLO00592 558 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 FAM13AO94988 1023 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 NHLH1Q02575 133 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 MCL1Q07820 350 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 PTPAQ15257 358 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 IER5LQ5T953 404 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 LIN9Q5TKA1 542 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 HAUS6Q7Z4H7 955 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 KCNN1Q92952 543 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 C18orf25Q96B23 403 aaPredicted RBP16.51■□□□□ 0.23
SMAD6-203ENST00000558937 BICD1Q96G01 975 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 HAPLN2Q9GZV7 340 aa16.51■□□□□ 0.23
SMAD6-203ENST00000558937 K7ENM7 598 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 TRAPPC3O43617 180 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 C8AP07357 584 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 SYT1P21579 422 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 AVPR2P30518 371 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 OR1D2P34982 312 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 MATR3P43243 847 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMAD6-203ENST00000558937 ZNF131P52739 623 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 RAB33AQ14088 237 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 SLC10A6Q3KNW5 377 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 PPM1LQ5SGD2 360 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 FAM173BQ6P4H8 233 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 RSPO2Q6UXX9 243 aaPredicted RBP16.5■□□□□ 0.23
SMAD6-203ENST00000558937 USP49Q70CQ1 688 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 GET4Q7L5D6 327 aaPredicted RBP16.5■□□□□ 0.23
SMAD6-203ENST00000558937 LARP4BQ92615 738 aaKnown RBP16.5■□□□□ 0.23
SMAD6-203ENST00000558937 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 KCNK12Q9HB15 430 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 PARVGQ9HBI0 331 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 EPS15L1Q9UBC2 864 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 BACE2Q9Y5Z0 518 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 CDY1Q9Y6F8 540 aa16.5■□□□□ 0.23
SMAD6-203ENST00000558937 CLDN3O15551 220 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 TRIOO75962 3097 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 KRT18P05783 430 aaKnown RBP16.49■□□□□ 0.23
SMAD6-203ENST00000558937 HNRNPA1P09651 372 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMAD6-203ENST00000558937 CXCL8P10145 99 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 MARCKSP29966 332 aaPredicted RBP16.49■□□□□ 0.23
SMAD6-203ENST00000558937 LIG4P49917 911 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 TDGQ13569 410 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 SPECC1Q5M775 1068 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 ANKS3Q6ZW76 656 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 MYCT1Q8N699 235 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 INTS4Q96HW7 963 aaKnown RBP16.49■□□□□ 0.23
SMAD6-203ENST00000558937 EPSTI1Q96J88 318 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 ZHX3Q9H4I2 956 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 IGSF9Q9P2J2 1179 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 TUBGCP4Q9UGJ1 667 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 FBXO2Q9UK22 296 aaPredicted RBP16.49■□□□□ 0.23
SMAD6-203ENST00000558937 DUSP12Q9UNI6 340 aa16.49■□□□□ 0.23
SMAD6-203ENST00000558937 CCL16O15467 120 aa16.48■□□□□ 0.23
SMAD6-203ENST00000558937 TRAK2O60296 914 aa16.48■□□□□ 0.23
SMAD6-203ENST00000558937 TBCAO75347 108 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms