RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 TARS2Q9BW92 718 aaKnown RBP6.1□□□□□ -1.43
SMAD3-209ENST00000558894 PRKD2Q9BZL6 878 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 PLEKHA4Q9H4M7 779 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 GOLGA2P5Q9HBQ8 144 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.1□□□□□ -1.43
SMAD3-209ENST00000558894 BLOC1S4Q9NUP1 217 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 DUSP12Q9UNI6 340 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 DNM3Q9UQ16 869 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 GDAQ9Y2T3 454 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 NUP210Q8TEM1 1887 aaPredicted RBP6.1□□□□□ -1.43
SMAD3-209ENST00000558894 CACNA1HO95180 2353 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 SF3B1O75533 1304 aaKnown RBP eCLIP6.09□□□□□ -1.435e-6■■■■■ 142.6
SMAD3-209ENST00000558894 SPTBN4Q9H254 2564 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 NPHP3-ACAD11A0A0J9YXS1 232 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 KRBA1A5PL33 1030 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 I3L4J1 428 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 NRG2O14511 850 aaPredicted RBP6.09□□□□□ -1.43
SMAD3-209ENST00000558894 SLC16A4O15374 487 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 NR1I2O75469 434 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 ABLIM3O94929 683 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 ADRB2P07550 413 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 POU2F2P09086 479 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 MAPTP10636 758 aaKnown RBP6.09□□□□□ -1.43
SMAD3-209ENST00000558894 MCF2P10911 925 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 LAMP2P13473 410 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 KCNE1P15382 129 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 LIG1P18858 919 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 BRCC3P46736 316 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 NUBP1P53384 320 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 NCKAP1LP55160 1127 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 NTHL1P78549 312 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 CUL4AQ13619 759 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 HTR4Q13639 388 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 RAB33AQ14088 237 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 MRPL58Q14197 206 aaKnown RBP6.09□□□□□ -1.43
SMAD3-209ENST00000558894 ZBTB6Q15916 424 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 PSMD5Q16401 504 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 SLC10A6Q3KNW5 377 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 SEZ6Q53EL9 994 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 KRT79Q5XKE5 535 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 ARL6IP4Q66PJ3 421 aaKnown RBP6.09□□□□□ -1.43
SMAD3-209ENST00000558894 DCLRE1AQ6PJP8 1040 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.09□□□□□ -1.43
SMAD3-209ENST00000558894 OTOP3Q7RTS5 596 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 HACE1Q8IYU2 909 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 SLC44A3Q8N4M1 653 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 KCTD17Q8N5Z5 321 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 SPIRE2Q8WWL2 714 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 SMG7Q92540 1137 aaKnown RBP6.09□□□□□ -1.43
SMAD3-209ENST00000558894 DDX27Q96GQ7 796 aaKnown RBP6.09□□□□□ -1.43
SMAD3-209ENST00000558894 IFT74Q96LB3 600 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 TTPALQ9BTX7 342 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 RPP25Q9BUL9 199 aaKnown RBP6.09□□□□□ -1.43
SMAD3-209ENST00000558894 C17orf75Q9HAS0 396 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 ZDHHC7Q9NXF8 308 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 CNTN3Q9P232 1028 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 MTRRQ9UBK8 725 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 BACE2Q9Y5Z0 518 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 STK24Q9Y6E0 443 aa6.09□□□□□ -1.43
SMAD3-209ENST00000558894 FRYLO94915 3013 aa6.09□□□□□ -1.44
SMAD3-209ENST00000558894 ZFHX2Q9C0A1 2572 aaPredicted RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 GREB1Q4ZG55 1949 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 VWA3AA6NCI4 1184 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 SHISA7A6NL88 538 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 CCDC169A6NNP5 214 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 PROB1E7EW31 1015 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 GALR2O43603 387 aaPredicted RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 ST18O60284 1047 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 VNN2O95498 520 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 HNRNPA1P09651 372 aaKnown RBP eCLIP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 PLA2G4BP0C869 781 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 PLS3P13797 630 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 AOC1P19801 751 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 TKTP29401 623 aaKnown RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 HOXA9P31269 272 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 OR1D2P34982 312 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 TNFSF9P41273 254 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 CLCN5P51795 746 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 ZNF131P52739 623 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 PTPN5P54829 565 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 OSTNP61366 133 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 CREMQ03060 361 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 RAD51AP2Q09MP3 1159 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 GNL2Q13823 731 aaKnown RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 PTPAQ15257 358 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 ZBTB41Q5SVQ8 909 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 ASTLQ6HA08 431 aaPredicted RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 SLC8B1Q6J4K2 584 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 SLC39A4Q6P5W5 647 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 MPZL3Q6UWV2 235 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 ZPBP2Q6X784 338 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 USP49Q70CQ1 688 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 ZBTB33Q86T24 672 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 CEP57Q86XR8 500 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 SUGP1Q8IWZ8 645 aaKnown RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 TMEM87AQ8NBN3 555 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 ST13P5Q8NFI4 369 aaPredicted RBP6.08□□□□□ -1.44
SMAD3-209ENST00000558894 ITFG1Q8TB96 612 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 FGF14Q92915 247 aa6.08□□□□□ -1.44
SMAD3-209ENST00000558894 C18orf25Q96B23 403 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms