RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 NOP9Q86U38 636 aaKnown RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 CBWD2Q8IUF1 395 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 RIOX2Q8IUF8 465 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 ARHGEF19Q8IW93 802 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 C12orf50Q8NA57 414 aaPredicted RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 DEPTORQ8TB45 409 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 TCP11Q8WWU5 503 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 PSPC1Q8WXF1 523 aaKnown RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 SLCO2A1Q92959 643 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 BICD1Q96G01 975 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 ATP6V1G3Q96LB4 118 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 ZIM3Q96PE6 472 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 FNBP1Q96RU3 617 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 ERP44Q9BS26 406 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 STMN4Q9H169 189 aaPredicted RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 MRPL47Q9HD33 250 aaKnown RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 A1CFQ9NQ94 594 aaKnown RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 ZNF302Q9NR11 478 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 SMARCAL1Q9NZC9 954 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 GPRC5DQ9NZD1 345 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 EHD2Q9NZN4 543 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 MTRF1LQ9UGC7 380 aaKnown RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 RIPK3Q9Y572 518 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 GJA3Q9Y6H8 435 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 DOCK1Q14185 1865 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 K7ERI5 159 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 NDC80O14777 642 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 CYP26A1O43174 497 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 ZNF862O60290 1169 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 LRRN2O75325 713 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 PPFIA2O75334 1257 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 SGPL1O95470 568 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 ADRB2P07550 413 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 CHRNB2P17787 502 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 CETN2P41208 172 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 SLC26A2P50443 739 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 PEX5P50542 639 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 DNA2P51530 1060 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 IRAK1P51617 712 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 GYS2P54840 703 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 HMGCS2P54868 508 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 CAV1Q03135 178 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 SLMAPQ14BN4 828 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 EMC2Q15006 297 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 CLEC16AQ2KHT3 1053 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 ZACNQ401N2 412 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 DNAJC21Q5F1R6 531 aaKnown RBP8.91□□□□□ -0.98
SPG11-209ENST00000558253 LIN9Q5TKA1 542 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 ANGEL2Q5VTE6 544 aaKnown RBP8.91□□□□□ -0.98
SPG11-209ENST00000558253 DUPD1Q68J44 220 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 CYFIP1Q7L576 1253 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 HOOK3Q86VS8 718 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 GSPT2Q8IYD1 628 aaKnown RBP8.91□□□□□ -0.98
SPG11-209ENST00000558253 TSEN2Q8NCE0 465 aaKnown RBP8.91□□□□□ -0.98
SPG11-209ENST00000558253 PROCA1Q8NCQ7 364 aaPredicted RBP8.91□□□□□ -0.98
SPG11-209ENST00000558253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.91□□□□□ -0.98
SPG11-209ENST00000558253 PLEKHO2Q8TD55 490 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 CD101Q93033 1021 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 CCDC127Q96BQ5 260 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 ARHGEF26Q96DR7 871 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 KREMEN1Q96MU8 473 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 CEP89Q96ST8 783 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 AP1M1Q9BXS5 423 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 PDGFDQ9GZP0 370 aaPredicted RBP8.91□□□□□ -0.98
SPG11-209ENST00000558253 POLR3FQ9H1D9 316 aaPredicted RBP8.91□□□□□ -0.98
SPG11-209ENST00000558253 C2orf40Q9H1Z8 148 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 IKZF4Q9H2S9 585 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 DHX33Q9H6R0 707 aaKnown RBP8.91□□□□□ -0.98
SPG11-209ENST00000558253 TMBIM4Q9HC24 238 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 OSGEPQ9NPF4 335 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 GPRC5CQ9NQ84 441 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 GGA2Q9UJY4 613 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 AGO2Q9UKV8 859 aaKnown RBP8.91□□□□□ -0.98
SPG11-209ENST00000558253 CNTN6Q9UQ52 1028 aa8.91□□□□□ -0.98
SPG11-209ENST00000558253 A0A0B4J269 797 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 EIF3HO15372 352 aaKnown RBP eCLIP8.9□□□□□ -0.98
SPG11-209ENST00000558253 SPOPO43791 374 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 EGFRP00533 1210 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 COMTP21964 271 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 EDNRBP24530 442 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 HSD17B3P37058 310 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 RNASE9P60153 205 aaKnown RBP8.9□□□□□ -0.98
SPG11-209ENST00000558253 FMO1Q01740 532 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 TAP1Q03518 808 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 MXD4Q14582 209 aaPredicted RBP8.9□□□□□ -0.98
SPG11-209ENST00000558253 IER5Q5VY09 327 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 LRRC31Q6UY01 552 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 MICALCLQ6ZW33 695 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 DEFB132Q7Z7B7 95 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 ANKRD35Q8N283 1001 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 BBOF1Q8ND07 529 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 ZNF564Q8TBZ8 553 aaPredicted RBP8.9□□□□□ -0.98
SPG11-209ENST00000558253 GRK7Q8WTQ7 553 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 SLC20A1Q8WUM9 679 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 SEPT1Q8WYJ6 367 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 PIK3R5Q8WYR1 880 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 DDX1Q92499 740 aaKnown RBP8.9□□□□□ -0.98
SPG11-209ENST00000558253 SEMA4DQ92854 862 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 ZKSCAN4Q969J2 545 aaPredicted RBP8.9□□□□□ -0.98
SPG11-209ENST00000558253 ZNF653Q96CK0 615 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms