RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 H0YCG3 227 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 DCXO43602 365 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 FAM13AO94988 1023 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 ADH1AP07327 375 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 WEE2P0C1S8 567 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 ALADP13716 330 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 KCNE1P15382 129 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 SOX4Q06945 474 aaPredicted RBP9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 MCL1Q07820 350 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 NOLC1Q14978 699 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 SLC10A6Q3KNW5 377 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 HERC4Q5GLZ8 1057 aaPredicted RBP9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 RTP2Q5QGT7 225 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 FAM171A1Q5VUB5 890 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 KIAA1841Q6NSI8 718 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 CES5AQ6NT32 575 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 TMC5Q6UXY8 1006 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 MYCT1Q8N699 235 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 KRI1Q8N9T8 703 aaKnown RBP9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 LINC00301Q8NCQ3 95 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 RASSF8Q8NHQ8 419 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 HASPINQ8TF76 798 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 RIN2Q8WYP3 895 aaPredicted RBP9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 SNX27Q96L92 541 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 NECTIN4Q96NY8 510 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 ACAP3Q96P50 834 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 LRFN3Q9BTN0 628 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 POMKQ9H5K3 350 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 PARVGQ9HBI0 331 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 TOPORSQ9NS56 1045 aaPredicted RBP9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 FNIP2Q9P278 1114 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 TFIP11Q9UBB9 837 aaKnown RBP9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 STK17AQ9UEE5 414 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 CCDC39Q9UFE4 941 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 MUTYHQ9UIF7 546 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 TBX20Q9UMR3 447 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 DENND4AQ7Z401 1863 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 ZNF318Q5VUA4 2279 aa9.61□□□□□ -0.87
SNRPA1-206ENST00000558059 TCHHQ07283 1943 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 SF3B1O75533 1304 aaKnown RBP eCLIP9.6□□□□□ -0.877e-7■■■■■ 63.2
SNRPA1-206ENST00000558059 ANK1P16157 1881 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 A0A087X0B3 334 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 FAM86C2PA6NEL3 165 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 MYMKA6NI61 221 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 TMEM189-UBE2V1I3L0A0 370 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 TRAK2O60296 914 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 C1RP00736 705 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 PIGRP01833 764 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 KRT18P05783 430 aaKnown RBP9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 HARSP12081 509 aaKnown RBP9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 RPL17P18621 184 aaKnown RBP9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 NMT1P30419 496 aaKnown RBP9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 MTHFRP42898 656 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 CLCNKBP51801 687 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 YARSP54577 528 aaKnown RBP9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 GTF2BQ00403 316 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 UPP1Q16831 310 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 SEZ6Q53EL9 994 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 TMEM31Q5JXX7 168 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 ATAT1Q5SQI0 421 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 FOXD4L5Q5VV16 416 aaPredicted RBP9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 RRAGBQ5VZM2 374 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 LILRA6Q6PI73 481 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 DCLRE1AQ6PJP8 1040 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 PRSS55Q6UWB4 352 aaPredicted RBP9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 GPR149Q86SP6 731 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 C3orf58Q8NDZ4 430 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 LNX1Q8TBB1 728 aaPredicted RBP9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 FOXD4L4Q8WXT5 416 aaPredicted RBP9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 PIK3R5Q8WYR1 880 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 DNAJC19Q96DA6 116 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 RIPOR3Q96MK2 946 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 CLSTN3Q9BQT9 956 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 TTPALQ9BTX7 342 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 PANK2Q9BZ23 570 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 ZHX3Q9H4I2 956 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 SFXN1Q9H9B4 322 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 GOLGA2P5Q9HBQ8 144 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 MAN1C1Q9NR34 630 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 CNTN3Q9P232 1028 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 ANKFY1Q9P2R3 1169 aa9.6□□□□□ -0.87
SNRPA1-206ENST00000558059 MUC6Q6W4X9 2439 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 K7ENM7 598 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 SPTLC2O15270 562 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 CLDN3O15551 220 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 ADAM12O43184 909 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 TGM5O43548 720 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 FAM189A1O60320 539 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 TBCAO75347 108 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 B3GAT3O94766 335 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 PAPLNO95428 1278 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 GLUD1P00367 558 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 SPATA31D3P0C874 917 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 ZSCAN22P10073 491 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 COL9A1P20849 921 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 SCP2P22307 547 aa9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 LSM11P83369 360 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 ELAVL2Q12926 359 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-206ENST00000558059 PKP1Q13835 747 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms