RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 Q6ZPA2 131 aa6.62□□□□□ -1.35
GPHN-215ENST00000557654 LRRC55Q6ZSA7 311 aa6.62□□□□□ -1.35
GPHN-215ENST00000557654 SYNE4Q8N205 404 aa6.62□□□□□ -1.35
GPHN-215ENST00000557654 DCBLD1Q8N8Z6 715 aa6.62□□□□□ -1.35
GPHN-215ENST00000557654 PROKR1Q8TCW9 393 aa6.62□□□□□ -1.35
GPHN-215ENST00000557654 LENG9Q96B70 501 aa6.62□□□□□ -1.35
GPHN-215ENST00000557654 COA7Q96BR5 231 aa6.62□□□□□ -1.35
GPHN-215ENST00000557654 TMX3Q96JJ7 454 aa6.62□□□□□ -1.35
GPHN-215ENST00000557654 ZSWIM1Q9BR11 485 aa6.62□□□□□ -1.35
GPHN-215ENST00000557654 SAP30BPQ9UHR5 308 aaKnown RBP6.62□□□□□ -1.35
GPHN-215ENST00000557654 NOP58Q9Y2X3 529 aaKnown RBP6.62□□□□□ -1.35
GPHN-215ENST00000557654 UNC119BA6NIH7 251 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 RNASET2O00584 256 aaKnown RBP6.61□□□□□ -1.35
GPHN-215ENST00000557654 ZRANB2O95218 330 aaKnown RBP eCLIP6.61□□□□□ -1.35
GPHN-215ENST00000557654 POMCP01189 267 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 LAG3P18627 525 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 KRT4P19013 534 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 SLC16A1P53985 500 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 UAP1L1Q3KQV9 507 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 TIGD2Q4W5G0 525 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 AGAP9Q5VTM2 703 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 TSHZ3Q63HK5 1081 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 SEM1Q6ZVN7 128 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 MIGA2Q7L4E1 593 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 VRK3Q8IV63 474 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 DRC7Q8IY82 874 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 OR56A1Q8NGH5 318 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 HDAC10Q969S8 669 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 CYFIP2Q96F07 1278 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 TDP1Q9NUW8 608 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 ANKFY1Q9P2R3 1169 aa6.61□□□□□ -1.35
GPHN-215ENST00000557654 KIAA0391O15091 583 aaKnown RBP6.6□□□□□ -1.35
GPHN-215ENST00000557654 ABHD16AO95870 558 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 ELANEP08246 267 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 IBSPP21815 317 aaPredicted RBP6.6□□□□□ -1.35
GPHN-215ENST00000557654 CCND1P24385 295 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 HMGA2P52926 109 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 KRT85P78386 507 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 BEAN1Q3B7T3 259 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 KCNV1Q6PIU1 500 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 RSPH3Q86UC2 560 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 LDLRAD3Q86YD5 345 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 PLXDC1Q8IUK5 500 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 CPEB3Q8NE35 698 aaKnown RBP6.6□□□□□ -1.35
GPHN-215ENST00000557654 SLC13A1Q9BZW2 595 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 BRINP2Q9C0B6 783 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 KLHL11Q9NVR0 708 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 HS3ST4Q9Y661 456 aa6.6□□□□□ -1.35
GPHN-215ENST00000557654 AATKQ6ZMQ8 1374 aa6.59□□□□□ -1.35
GPHN-215ENST00000557654 DIRC3C9JPN6 131 aa6.59□□□□□ -1.35
GPHN-215ENST00000557654 SBK3P0C264 359 aa6.59□□□□□ -1.35
GPHN-215ENST00000557654 ZNF280AP59817 542 aaPredicted RBP6.59□□□□□ -1.35
GPHN-215ENST00000557654 RHOT2Q8IXI1 618 aa6.59□□□□□ -1.35
GPHN-215ENST00000557654 IFI44Q8TCB0 444 aa6.59□□□□□ -1.35
GPHN-215ENST00000557654 MYEOVQ96EZ4 313 aa6.59□□□□□ -1.35
GPHN-215ENST00000557654 ADAM2Q99965 735 aa6.59□□□□□ -1.35
GPHN-215ENST00000557654 GSTO2Q9H4Y5 243 aa6.59□□□□□ -1.35
GPHN-215ENST00000557654 PCDHB1Q9Y5F3 818 aa6.59□□□□□ -1.35
GPHN-215ENST00000557654 hCG_2014768A0A024R1R8 64 aa6.58□□□□□ -1.36
GPHN-215ENST00000557654 CDHR4A6H8M9 788 aa6.58□□□□□ -1.36
GPHN-215ENST00000557654 TEX33O43247 280 aa6.58□□□□□ -1.36
GPHN-215ENST00000557654 SLC6A4P31645 630 aa6.58□□□□□ -1.36
GPHN-215ENST00000557654 CDC42EP1Q00587 391 aa6.58□□□□□ -1.36
GPHN-215ENST00000557654 C11orf54Q9H0W9 315 aaPredicted RBP6.58□□□□□ -1.36
GPHN-215ENST00000557654 DKK2Q9UBU2 259 aa6.58□□□□□ -1.36
GPHN-215ENST00000557654 USP25Q9UHP3 1055 aa6.58□□□□□ -1.36
GPHN-215ENST00000557654 ATP11BQ9Y2G3 1177 aa6.58□□□□□ -1.36
GPHN-215ENST00000557654 FPGT-TNNI3KV9GXZ4 949 aa6.58□□□□□ -1.36
GPHN-215ENST00000557654 TMEM200CA6NKL6 621 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 SPATA31D3P0C874 917 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 ADKP55263 362 aaKnown RBP6.57□□□□□ -1.36
GPHN-215ENST00000557654 CTXN1P60606 82 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 NOMO3P69849 1222 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 CREMQ03060 361 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 OCA2Q04671 838 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 FSTL1Q12841 308 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 RESTQ13127 1097 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 NOMO2Q5JPE7 1267 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 LY6G5CQ5SRR4 150 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 SPATA31D4Q6ZUB0 917 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 AMER2Q8N7J2 671 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 STAG1Q8WVM7 1258 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 CHFRQ96EP1 664 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 DMRTA2Q96SC8 542 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 TTPALQ9BTX7 342 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 IKZF4Q9H2S9 585 aa6.57□□□□□ -1.36
GPHN-215ENST00000557654 GAGE12BA1L429 117 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 GAGE12HA6NDE8 117 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 MARCH11A6NNE9 402 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 GRM6O15303 877 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 CFIP05156 583 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 FGFR4P22455 802 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 GCSHP23434 173 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 DDX6P26196 483 aaKnown RBP eCLIP6.56□□□□□ -1.36
GPHN-215ENST00000557654 HSD11B2P80365 405 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 TP53BP2Q13625 1128 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 B3GNTL1Q67FW5 361 aaPredicted RBP6.56□□□□□ -1.36
GPHN-215ENST00000557654 ZBTB46Q86UZ6 589 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 MAPKAPK5Q8IW41 473 aa6.56□□□□□ -1.36
GPHN-215ENST00000557654 CMTR2Q8IYT2 770 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms