RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 ZNF76P36508 570 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 TNP2Q05952 138 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 HTR4Q13639 388 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 MTERF2Q49AM1 385 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 PLA2G4FQ68DD2 849 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 TWF2Q6IBS0 349 aaKnown RBP8.91□□□□□ -0.98
RD3L-201ENST00000557640 B3GNT9Q6UX72 402 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 OTOP3Q7RTS5 596 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 SMAP1Q8IYB5 467 aaPredicted RBP8.91□□□□□ -0.98
RD3L-201ENST00000557640 RUFY2Q8WXA3 655 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 FAM167AQ96KS9 214 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 SCLT1Q96NL6 688 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 RTP3Q9BQQ7 232 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 RPP25Q9BUL9 199 aaKnown RBP8.91□□□□□ -0.98
RD3L-201ENST00000557640 TRAIPQ9BWF2 469 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 MINDY3Q9H8M7 445 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 FAM105AQ9NUU6 356 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 CACNG4Q9UBN1 327 aa8.91□□□□□ -0.98
RD3L-201ENST00000557640 NID2Q14112 1375 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 WDFY3Q8IZQ1 3526 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 ESYT2A0FGR8 921 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 WDR64B1ANS9 1081 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 INPPL1O15357 1258 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 TEX28O15482 410 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 PAPLNO95428 1278 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 SPATA31D3P0C874 917 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 SRFP11831 508 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 CPA1P15085 419 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 ALAS2P22557 587 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 GBP2P32456 591 aaPredicted RBP8.9□□□□□ -0.98
RD3L-201ENST00000557640 CIITAP33076 1130 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 SETQ01105 290 aaPredicted RBP8.9□□□□□ -0.98
RD3L-201ENST00000557640 EXOSC10Q01780 885 aaKnown RBP8.9□□□□□ -0.98
RD3L-201ENST00000557640 TLR1Q15399 786 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 PFKFB3Q16875 520 aaPredicted RBP8.9□□□□□ -0.98
RD3L-201ENST00000557640 GLB1LQ6UWU2 654 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 C15orf39Q6ZRI6 1047 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 FAM43BQ6ZT52 329 aaPredicted RBP8.9□□□□□ -0.98
RD3L-201ENST00000557640 SPATA31D4Q6ZUB0 917 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 SLC44A3Q8N4M1 653 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 CMASQ8NFW8 434 aaPredicted RBP8.9□□□□□ -0.98
RD3L-201ENST00000557640 KCNG4Q8TDN1 519 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 SLC5A5Q92911 643 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 ACSF2Q96CM8 615 aaPredicted RBP8.9□□□□□ -0.98
RD3L-201ENST00000557640 HERC2P3Q9BVR0 1158 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 ZMYND12Q9H0C1 365 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 IFT122Q9HBG6 1241 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 GOLGA2P5Q9HBQ8 144 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 WDR6Q9NNW5 1121 aaKnown RBP8.9□□□□□ -0.98
RD3L-201ENST00000557640 ARHGEF3Q9NR81 526 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 DISC1Q9NRI5 854 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 TBC1D22BQ9NU19 505 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 AGPAT5Q9NUQ2 364 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 WRAP73Q9P2S5 460 aaPredicted RBP8.9□□□□□ -0.98
RD3L-201ENST00000557640 EPS15L1Q9UBC2 864 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 CEP131Q9UPN4 1083 aa8.9□□□□□ -0.98
RD3L-201ENST00000557640 PRG3Q9Y2Y8 225 aaPredicted RBP8.9□□□□□ -0.98
RD3L-201ENST00000557640 SPEGQ15772 3267 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 RALGAPA1Q6GYQ0 2036 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 KLF18A0A0U1RQI7 1052 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 CCDC195A0A1B0GUA6 201 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 ANHXE9PGG2 379 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 hCG_1984214I3L0E3 225 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 NRP1O14786 923 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 ZBTB43O43298 467 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 TDP2O95551 362 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 POMCP01189 267 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 KLRC2P26717 231 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 HOXA11P31270 313 aaPredicted RBP8.89□□□□□ -0.99
RD3L-201ENST00000557640 TBC1D8BQ0IIM8 1120 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 TMEM259Q4ZIN3 620 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 ARSJQ5FYB0 599 aaPredicted RBP8.89□□□□□ -0.99
RD3L-201ENST00000557640 GET4Q7L5D6 327 aaPredicted RBP8.89□□□□□ -0.99
RD3L-201ENST00000557640 REXO1Q8N1G1 1221 aaKnown RBP8.89□□□□□ -0.99
RD3L-201ENST00000557640 TMTC2Q8N394 836 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 ZNF713Q8N859 430 aaPredicted RBP8.89□□□□□ -0.99
RD3L-201ENST00000557640 SMG8Q8ND04 991 aaKnown RBP8.89□□□□□ -0.99
RD3L-201ENST00000557640 PJA1Q8NG27 643 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 FGF14Q92915 247 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 NLRP4Q96MN2 994 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 RBM28Q9NW13 759 aaKnown RBP8.89□□□□□ -0.99
RD3L-201ENST00000557640 DACT1Q9NYF0 836 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 IGSF9Q9P2J2 1179 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 WNT16Q9UBV4 365 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 MTF2Q9Y483 593 aaPredicted RBP8.89□□□□□ -0.99
RD3L-201ENST00000557640 SAMM50Q9Y512 469 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 PCDHB2Q9Y5E7 798 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 NUMBLQ9Y6R0 609 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 ASPMQ8IZT6 3477 aa8.89□□□□□ -0.99
RD3L-201ENST00000557640 KIF26AQ9ULI4 1882 aaPredicted RBP8.88□□□□□ -0.99
RD3L-201ENST00000557640 SHISA7A6NL88 538 aa8.88□□□□□ -0.99
RD3L-201ENST00000557640 ZNF623O75123 536 aa8.88□□□□□ -0.99
RD3L-201ENST00000557640 PSMD10O75832 226 aa8.88□□□□□ -0.99
RD3L-201ENST00000557640 SOD2P04179 222 aa8.88□□□□□ -0.99
RD3L-201ENST00000557640 RPL17P18621 184 aaKnown RBP8.88□□□□□ -0.99
RD3L-201ENST00000557640 SFPQP23246 707 aaKnown RBP eCLIP8.88□□□□□ -0.99
RD3L-201ENST00000557640 AK2P54819 239 aa8.88□□□□□ -0.99
RD3L-201ENST00000557640 NTHL1P78549 312 aa8.88□□□□□ -0.99
RD3L-201ENST00000557640 RNASELQ05823 741 aaKnown RBP8.88□□□□□ -0.99
RD3L-201ENST00000557640 DSC1Q08554 894 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms