RNA–Protein interactions for RNA: ENST00000557403.5

RBM23-229, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 826 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-229	ENST00000557403	PACS2	Q86VP3	889 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	PPFIBP1	Q86W92	1011 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	GLYCTK	Q8IVS8	523 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	RNF168	Q8IYW5	571 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	TMEM161B	Q8NDZ6	487 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	SLC22A17	Q8WUG5	538 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	LARP4B	Q92615	738 aa	Known RBP	10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	BICD1	Q96G01	975 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	ZBTB45	Q96K62	511 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	CLIC6	Q96NY7	704 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	USP28	Q96RU2	1077 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	GPR62	Q9BZJ7	368 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	CCSER1	Q9C0I3	900 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	ZHX3	Q9H4I2	956 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	PTPRH	Q9HD43	1115 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	LARS	Q9P2J5	1176 aa	Known RBP	10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	MUTYH	Q9UIF7	546 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	ODF2L	Q9ULJ1	636 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	SSX2IP	Q9Y2D8	614 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	SRPRB	Q9Y5M8	271 aa	Known RBP	10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	C2orf16	Q68DN1	1984 aa		10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
RBM23-229	ENST00000557403	VWA8	A3KMH1	1905 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	LOC730098	B7Z3J9	87 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	C3orf80	F5H4A9	247 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403		H0YCG3	227 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403		K7ENM7	598 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	ABLIM1	O14639	778 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	TEX28	O15482	410 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	DCX	O43602	365 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	LILRB3	O75022	631 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	TBCA	O75347	108 aa	Known RBP	10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	EFEMP2	O95967	443 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	ADH1A	P07327	375 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	MYB	P10242	640 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	MAPT	P10636	758 aa	Known RBP	10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	MCF2	P10911	925 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	ALAD	P13716	330 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	PROZ	P22891	400 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	TXLNA	P40222	546 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	MATR3	P43243	847 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	CLCN4	P51793	760 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	NCKAP1L	P55160	1127 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	DSG1	Q02413	1049 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	ITIH3	Q06033	890 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	NAB2	Q15742	525 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	USP41	Q3LFD5	358 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	TMEM31	Q5JXX7	168 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	KIAA0319	Q5VV43	1072 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	TMC5	Q6UXY8	1006 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	RNF135	Q8IUD6	432 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	MYCT1	Q8N699	235 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	RIN2	Q8WYP3	895 aa	Predicted RBP	10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	FBXL18	Q96ME1	805 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	NTPCR	Q9BSD7	190 aa	Known RBP	10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	POMK	Q9H5K3	350 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	SFXN1	Q9H9B4	322 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	PARVG	Q9HBI0	331 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	GOLGA2P5	Q9HBQ8	144 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	MAN1C1	Q9NR34	630 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	CCDC39	Q9UFE4	941 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	KCNG1	Q9UIX4	513 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	DENND4A	Q7Z401	1863 aa		10.01	□□□□□ -0.81
RBM23-229	ENST00000557403	MTCL1	Q9Y4B5	1905 aa	Known RBP	10	□□□□□ -0.81
RBM23-229	ENST00000557403	TOM1L1	O75674	476 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	GLUD1	P00367	558 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	RPL17	P18621	184 aa	Known RBP	10	□□□□□ -0.81
RBM23-229	ENST00000557403	MTHFR	P42898	656 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	PRSS12	P56730	875 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	STK38	Q15208	465 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	SEZ6	Q53EL9	994 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	RTP2	Q5QGT7	225 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	FAM171A1	Q5VUB5	890 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	RRAGB	Q5VZM2	374 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	PRSS55	Q6UWB4	352 aa	Predicted RBP	10	□□□□□ -0.81
RBM23-229	ENST00000557403	DYM	Q7RTS9	669 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	HAUS6	Q7Z4H7	955 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	CEP57	Q86XR8	500 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	KRI1	Q8N9T8	703 aa	Known RBP	10	□□□□□ -0.81
RBM23-229	ENST00000557403	FEZF2	Q8TBJ5	459 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	SNX27	Q96L92	541 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	RIPOR3	Q96MK2	946 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	NECTIN4	Q96NY8	510 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	ACAP3	Q96P50	834 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	PPP1R10	Q96QC0	940 aa	Known RBP	10	□□□□□ -0.81
RBM23-229	ENST00000557403	LRFN3	Q9BTN0	628 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	ADAM7	Q9H2U9	754 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	RXFP1	Q9HBX9	757 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	C11orf16	Q9NQ32	467 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	CHST7	Q9NS84	486 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	DAXX	Q9UER7	740 aa	Predicted RBP	10	□□□□□ -0.81
RBM23-229	ENST00000557403	TRIO	O75962	3097 aa		10	□□□□□ -0.81
RBM23-229	ENST00000557403	SMIM28	A0A1B0GU29	152 aa		9.99	□□□□□ -0.81
RBM23-229	ENST00000557403	HNRNPDL	O14979	420 aa	Known RBP	9.99	□□□□□ -0.81
RBM23-229	ENST00000557403	CLDN3	O15551	220 aa		9.99	□□□□□ -0.81
RBM23-229	ENST00000557403	TRAK2	O60296	914 aa		9.99	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms