RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 OCA2Q04671 838 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 SCAPQ12770 1279 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 UBXN2BQ14CS0 331 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 SEPT2Q15019 361 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 STRIP1Q5VSL9 837 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 OTUD7BQ6GQQ9 843 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 WDR66Q8TBY9 1149 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 ZSWIM1Q9BR11 485 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 REXO4Q9GZR2 422 aaKnown RBP5.83□□□□□ -1.48
VRK1-207ENST00000557352 SLC23A1Q9UHI7 598 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 AJAP1Q9UKB5 411 aaPredicted RBP5.83□□□□□ -1.48
VRK1-207ENST00000557352 PCDHGA2Q9Y5H1 932 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 POLR2AP24928 1970 aaKnown RBP5.83□□□□□ -1.48
VRK1-207ENST00000557352 A0A1B0GTW7 788 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 CCDC78A2IDD5 438 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 ENDOD1O94919 500 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 OSMP13725 252 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 MGAT2Q10469 447 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 SPDYE7PQ495Y7 208 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 KRT26Q7Z3Y9 468 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 GPR149Q86SP6 731 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 SPATS2Q86XZ4 545 aaKnown RBP5.82□□□□□ -1.48
VRK1-207ENST00000557352 ADGRG3Q86Y34 549 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.82□□□□□ -1.48
VRK1-207ENST00000557352 NTN5Q8WTR8 489 aaPredicted RBP5.82□□□□□ -1.48
VRK1-207ENST00000557352 COG1Q8WTW3 980 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 CASKIN2Q8WXE0 1202 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 VOPP1Q96AW1 172 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 BBC3Q96PG8 261 aaPredicted RBP5.82□□□□□ -1.48
VRK1-207ENST00000557352 MYOCQ99972 504 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 ALOXE3Q9BYJ1 711 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 TMEM140Q9NV12 185 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 ACTL7AQ9Y615 435 aa5.82□□□□□ -1.48
VRK1-207ENST00000557352 PRSS23O95084 383 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 ESRRBO95718 433 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 FGFR4P22455 802 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 GCSHP23434 173 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 SLC6A2P23975 617 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 PCSK1P29120 753 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 CNGA1P29973 690 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 PLA2G5P39877 138 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 MPLP40238 635 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 ERVK-21P61565 698 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 PRR16Q569H4 304 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 ZNF529Q6P280 563 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 SEM1Q6ZVN7 128 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 OR2I1PQ8NGU4 316 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 ZNF764Q96H86 408 aaPredicted RBP5.81□□□□□ -1.48
VRK1-207ENST00000557352 RNPEPQ9H4A4 650 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 PRDM13Q9H4Q3 707 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 FBXO34Q9NWN3 711 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 PTGFRNQ9P2B2 879 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 NOX1Q9Y5S8 564 aa5.81□□□□□ -1.48
VRK1-207ENST00000557352 MAST3O60307 1309 aa5.8□□□□□ -1.48
VRK1-207ENST00000557352 CXADRP78310 365 aa5.8□□□□□ -1.48
VRK1-207ENST00000557352 MPP3Q13368 585 aa5.8□□□□□ -1.48
VRK1-207ENST00000557352 RNF219Q5W0B1 726 aaPredicted RBP5.8□□□□□ -1.48
VRK1-207ENST00000557352 SLC44A3Q8N4M1 653 aa5.8□□□□□ -1.48
VRK1-207ENST00000557352 FUBP1Q96AE4 644 aaKnown RBP5.8□□□□□ -1.48
VRK1-207ENST00000557352 CYFIP2Q96F07 1278 aa5.8□□□□□ -1.48
VRK1-207ENST00000557352 BOD1Q96IK1 185 aa5.8□□□□□ -1.48
VRK1-207ENST00000557352 SLC2A13Q96QE2 648 aa5.8□□□□□ -1.48
VRK1-207ENST00000557352 FAM126AQ9BYI3 521 aaPredicted RBP5.8□□□□□ -1.48
VRK1-207ENST00000557352 TMEM74BQ9NUR3 256 aa5.8□□□□□ -1.48
VRK1-207ENST00000557352 GPR45Q9Y5Y3 372 aa5.8□□□□□ -1.48
VRK1-207ENST00000557352 AATKQ6ZMQ8 1374 aa5.8□□□□□ -1.48
VRK1-207ENST00000557352 COL11A2P13942 1736 aaPredicted RBP5.79□□□□□ -1.48
VRK1-207ENST00000557352 FAM171A2A8MVW0 826 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 K7ESF4 209 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 TEX33O43247 280 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 CLSTN1O94985 981 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 AMY1AP04745 511 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 POU3F3P20264 500 aaPredicted RBP5.79□□□□□ -1.48
VRK1-207ENST00000557352 FDXRP22570 491 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 CXCR5P32302 372 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 HSD11B2P80365 405 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 CCDC142Q17RM4 750 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 ERCC6LQ2NKX8 1250 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 UBE3BQ7Z3V4 1068 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 FAM43AQ8N2R8 423 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 CCHCR1Q8TD31 782 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 RNF31Q96EP0 1072 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 Q96MF0 132 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 R3HDMLQ9H3Y0 253 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 ALG13Q9NP73 1137 aaKnown RBP5.79□□□□□ -1.48
VRK1-207ENST00000557352 ZNF277Q9NRM2 450 aaPredicted RBP5.79□□□□□ -1.48
VRK1-207ENST00000557352 TESQ9UGI8 421 aaKnown RBP5.79□□□□□ -1.48
VRK1-207ENST00000557352 USP25Q9UHP3 1055 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 DNM3Q9UQ16 869 aa5.79□□□□□ -1.48
VRK1-207ENST00000557352 WASHC2AQ641Q2 1341 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 SALL3Q9BXA9 1300 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 GPR32O75388 356 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 GPANK1O95872 356 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 CKBP12277 381 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 MTM1Q13496 603 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 ZGPATQ8N5A5 531 aaKnown RBP5.78□□□□□ -1.48
VRK1-207ENST00000557352 SIMC1Q8NDZ2 872 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 SLC9A6Q92581 669 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 NACC2Q96BF6 587 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 GALNT9Q9HCQ5 603 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms