RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 GTF2F1P35269 517 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLIRP-209ENST00000557342 GLUD2P49448 558 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 NDUFV1P49821 464 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 TFF2Q03403 129 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 EHHADHQ08426 723 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 KCNA1Q09470 495 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 TPRNQ4KMQ1 711 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 KIAA1841Q6NSI8 718 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 KANK3Q6NY19 840 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 DCLRE1AQ6PJP8 1040 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 PPFIBP1Q86W92 1011 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 GPR65Q8IYL9 337 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 CCDC47Q96A33 483 aaKnown RBP13.6□□□□□ -0.23
SLIRP-209ENST00000557342 PAAF1Q9BRP4 392 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 CHMP5Q9NZZ3 219 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 CPSF3Q9UKF6 684 aaKnown RBP13.6□□□□□ -0.23
SLIRP-209ENST00000557342 FAM50BQ9Y247 325 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 VWA8A3KMH1 1905 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 KIAA0391O15091 583 aaKnown RBP13.59□□□□□ -0.23
SLIRP-209ENST00000557342 ZNF202O95125 648 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 KIF4AO95239 1232 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 ADRB2P07550 413 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 CASP1P29466 404 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 TNFSF9P41273 254 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 CLCNKBP51801 687 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 DSG1Q02413 1049 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 CREMQ03060 361 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 PSMD2Q13200 908 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 UPP1Q16831 310 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 TMEM184AQ6ZMB5 413 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 KRBA2Q6ZNG9 492 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 GRAMD1CQ8IYS0 662 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 ZNF507Q8TCN5 953 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 AUTS2Q8WXX7 1259 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 CASP10Q92851 521 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 ZMAT2Q96NC0 199 aaKnown RBP13.59□□□□□ -0.23
SLIRP-209ENST00000557342 FGFBP2Q9BYJ0 223 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 GPR62Q9BZJ7 368 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 CHST7Q9NS84 486 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 EXOC1Q9NV70 894 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 CACNG4Q9UBN1 327 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 UBQLN1Q9UMX0 589 aaKnown RBP13.59□□□□□ -0.23
SLIRP-209ENST00000557342 PLXNA3P51805 1871 aa13.59□□□□□ -0.23
SLIRP-209ENST00000557342 LACTBL1A8MY62 500 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 TISP43B9A030 160 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 F8W810 466 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 LINC01565O15544 149 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 MEFVO15553 781 aaPredicted RBP13.58□□□□□ -0.24
SLIRP-209ENST00000557342 TRAPPC3O43617 180 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 LILRB3O75022 631 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 CLASP2O75122 1294 aaKnown RBP13.58□□□□□ -0.24
SLIRP-209ENST00000557342 B3GAT3O94766 335 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 CYP3A5P20815 502 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 ADSSP30520 456 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 LTBRP36941 435 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 ACOT2P49753 483 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 SNRPFP62306 86 aaKnown RBP13.58□□□□□ -0.24
SLIRP-209ENST00000557342 ENOX2Q16206 610 aaKnown RBP13.58□□□□□ -0.24
SLIRP-209ENST00000557342 ZBTB41Q5SVQ8 909 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 KIAA0319Q5VV43 1072 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 ARMCX5Q6P1M9 558 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 PDXDC1Q6P996 788 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 EPM2AIP1Q7L775 607 aaPredicted RBP13.58□□□□□ -0.24
SLIRP-209ENST00000557342 TAS1R1Q7RTX1 841 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 HASPINQ8TF76 798 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 HPS3Q969F9 1004 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 FAM212AQ96EL1 285 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 KIF12Q96FN5 646 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 GOLPH3LQ9H4A5 285 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 ASB7Q9H672 318 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.58□□□□□ -0.244e-7■■□□□ 12.6
SLIRP-209ENST00000557342 CD207Q9UJ71 328 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 DERAQ9Y315 318 aa13.58□□□□□ -0.24
SLIRP-209ENST00000557342 REV3LO60673 3130 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 BRWD1Q9NSI6 2320 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 H3BQ06 376 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-209ENST00000557342 PODXLO00592 558 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 C2CD2LO14523 706 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 KLRC4O43908 158 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 TBX10O75333 385 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 IL18RAPO95256 599 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 GLP2RO95838 553 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 BMP1P13497 986 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 KLRC2P26717 231 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 KCNQ1P51787 676 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 SOX4Q06945 474 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-209ENST00000557342 DLX2Q07687 328 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-209ENST00000557342 KCNC3Q14003 757 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 ZBTB6Q15916 424 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 KMT5BQ4FZB7 885 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 FAM171A1Q5VUB5 890 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 PTCRAQ6ISU1 281 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-209ENST00000557342 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-209ENST00000557342 NT5DC4Q86YG4 428 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 BEST2Q8NFU1 509 aa13.57□□□□□ -0.24
SLIRP-209ENST00000557342 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms