RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 LRRCC1Q9C099 1032 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 RNPEPQ9H4A4 650 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 USP15Q9Y4E8 981 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-247ENST00000557311 CORINQ9Y5Q5 1042 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 PTPRZ1P23471 2315 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 ARID1BQ8NFD5 2236 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 REV3LO60673 3130 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 GOLGA6L3A6NEY3 463 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 ORC4O43929 436 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 SLITRK5O94991 958 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 CST3P01034 146 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 SMIM10L2AP0DMW4 78 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 SMIM10L2BP0DMW5 78 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 SNHG28P0DPA3 235 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 HSPD1P10809 573 aaKnown RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 PDHBP11177 359 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 HOXC8P31273 242 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 ZNF76P36508 570 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 EIF4A3P38919 411 aaKnown RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 NRIP1P48552 1158 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 YARSP54577 528 aaKnown RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 DMTNQ08495 405 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 ZNF543Q08ER8 600 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 PTPN21Q16825 1174 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 HSDL1Q3SXM5 330 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 USH1GQ495M9 461 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 MCTP2Q6DN12 878 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 ZNF746Q6NUN9 644 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 ZNF574Q6ZN55 896 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 NFXL1Q6ZNB6 911 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 CDH24Q86UP0 819 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 UBALD2Q8IYN6 164 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 ADSSL1Q8N142 457 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 AGBL5Q8NDL9 886 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 MICAL1Q8TDZ2 1067 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 SUSD6Q92537 303 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 ZNF689Q96CS4 500 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 MISP3Q96FF7 219 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 GPATCH3Q96I76 525 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 SEC62Q99442 399 aaKnown RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 TLE6Q9H808 572 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 YY1AP1Q9H869 796 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 MLXIPQ9HAP2 919 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 ZBTB40Q9NUA8 1239 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 COL20A1Q9P218 1284 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 TJP2Q9UDY2 1190 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 ANAPC4Q9UJX5 808 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 MRPL11Q9Y3B7 192 aaKnown RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 BRWD1Q9NSI6 2320 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 SCN10AQ9Y5Y9 1956 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 NAV1Q8NEY1 1877 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 GBF1Q92538 1859 aa5.6□□□□□ -1.51
ATXN3-247ENST00000557311 COL11A1P12107 1806 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-247ENST00000557311 TRANK1O15050 2925 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 ABCB11O95342 1321 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 ADGRA3Q8IWK6 1321 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 FSD2A1L4K1 749 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 RBAK-RBAKDNI3L0D1 243 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 SMARCA5O60264 1052 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 CILPO75339 1184 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 DGKIO75912 1065 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 CSPG5O95196 566 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 LETM1O95202 739 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 GGPS1O95749 300 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 CHRNA1P02708 482 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 ITGB1P05556 798 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 DNAJB1P25685 340 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 CD96P40200 585 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 RBM25P49756 843 aaKnown RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 OXCT1P55809 520 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 IKZF1Q13422 519 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 MRPL58Q14197 206 aaKnown RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 ALX1Q15699 326 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 GPATCH4Q5T3I0 446 aaKnown RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 SLC6A19Q695T7 634 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 FRMD5Q7Z6J6 570 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 ADGRD2Q7Z7M1 963 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 RBM23Q86U06 439 aaKnown RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 EGFL6Q8IUX8 553 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 PHACTR4Q8IZ21 702 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 ABI1Q8IZP0 508 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 FBXO27Q8NI29 283 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 ATP8B4Q8TF62 1192 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 BCL7CQ8WUZ0 217 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 POF1BQ8WVV4 589 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 RHOVQ96L33 236 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 HEXIM2Q96MH2 286 aaKnown RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 NEK1Q96PY6 1258 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 CDCA3Q99618 268 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 UBA5Q9GZZ9 404 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 EHMT1Q9H9B1 1298 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 RC3H2Q9HBD1 1191 aaKnown RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 PXMP2Q9NR77 195 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 TOMM22Q9NS69 142 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 SETD4Q9NVD3 440 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 MAP3K20Q9NYL2 800 aaKnown RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 BARX2Q9UMQ3 279 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-247ENST00000557311 DDX19BQ9UMR2 479 aa5.59□□□□□ -1.51
ATXN3-247ENST00000557311 MYO5AQ9Y4I1 1855 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms