RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 AP5M1Q9H0R1 490 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 VPS11Q9H270 941 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 SP110Q9HB58 689 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 AKAP7Q9P0M2 348 aaPredicted RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 SNIP1Q8TAD8 396 aaKnown RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 PPP2R3CQ969Q6 453 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 ATP5JP18859 108 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 ITGA6P23229 1130 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 KLHL17Q6TDP4 642 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 MCPH1Q8NEM0 835 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 MYH7P12883 1935 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 SCP2P22307 547 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 CSE1LP55060 971 aaKnown RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 RBL2Q08999 1139 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 MZT2BQ6NZ67 158 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 INPP5DQ92835 1189 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 NCOA5Q9HCD5 579 aaKnown RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 COMMD9Q9P000 198 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 SMCO3A2RU48 225 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 EXTL3O43909 919 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 ERN1O75460 977 aaKnown RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 MYL4P12829 197 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 COPAP53621 1224 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 KCTD2Q14681 263 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 CACHD1Q5VU97 1274 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 TMEM154Q6P9G4 183 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 SETD9Q8NE22 299 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 PLEKHA4Q9H4M7 779 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 PCDHA4Q9UN74 947 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 ALDH1A2O94788 518 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 PSAPP07602 524 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 PLA2G4AP47712 749 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 PSMD4P55036 377 aaKnown RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 GPC5P78333 572 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 SPDYAQ5MJ70 313 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 RHOT1Q8IXI2 618 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 FANCBQ8NB91 859 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 IGF1RP08069 1367 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 SDC4P31431 198 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 KCNJ6P48051 423 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 CLEC16AQ2KHT3 1053 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 TAF8Q7Z7C8 310 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 LCORLQ8N3X6 602 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 SH3GLB1Q9Y371 365 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 ZNF862O60290 1169 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 KATNA1O75449 491 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 SEC24DO94855 1032 aaPredicted RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 YWHABP31946 246 aaKnown RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 EIF4A3P38919 411 aaKnown RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 PRMT9Q6P2P2 845 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 TMC4Q7Z404 712 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 RMND5AQ9H871 391 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 NPR3P17342 541 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 AP1S1P61966 158 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 NFIAQ12857 509 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 DNAJC7Q99615 494 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 EMC3Q9P0I2 261 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 GFPT2O94808 682 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 TRIP10Q15642 601 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ZNF667Q5HYK9 610 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 RNASE11Q8TAA1 199 aaKnown RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 XAGE2Q96GT9 111 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ZNF577Q9BSK1 485 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 KLRF2D3W0D1 207 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 CLPTM1O96005 669 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 PI4K2BQ8TCG2 481 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 CAMKK2Q96RR4 588 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 FAM167BQ9BTA0 163 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 NDST4Q9H3R1 872 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 RPAP1Q9BWH6 1393 aaPredicted RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 GPS1Q13098 491 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 SNX17Q15036 470 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 FBXO38Q6PIJ6 1188 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ELMO2Q96JJ3 720 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 AP3M1Q9Y2T2 418 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 POLR1AO95602 1720 aaPredicted RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 TSPOAP1O95153 1857 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 GOLGA8SH3BPF8 625 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 MYL2P10916 166 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 GSPT1P15170 499 aaKnown RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 NDUFA8P51970 172 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 TRAPPC3LQ5T215 181 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 AGBL2Q5U5Z8 902 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ZCCHC8Q6NZY4 707 aaKnown RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 CCDC33Q8N5R6 958 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 CCDC59Q9P031 241 aaKnown RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 SLC9A2Q9UBY0 812 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 RSL24D1Q9UHA3 163 aaKnown RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 SKP1P63208 163 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 GSTA3Q16772 222 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 RSBN1Q5VWQ0 802 aaPredicted RBP9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ZFP1Q6P2D0 407 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 AP3S1Q92572 193 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 CCDC162PA2VCL2 907 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 INO80B-WBP1J3KQ70 363 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 ADCY6O43306 1168 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 KITP10721 976 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 PLEKHA7Q6IQ23 1121 aa9.25□□□□□ -0.93
SYNE3-205ENST00000557275 OR8H2Q8N162 312 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms