RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 MYCT1Q8N699 235 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 TMEM87AQ8NBN3 555 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 CMASQ8NFW8 434 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-224ENST00000556737 LNX1Q8TBB1 728 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-224ENST00000556737 C18orf25Q96B23 403 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-224ENST00000556737 UROC1Q96N76 676 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 NECTIN4Q96NY8 510 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 TTPALQ9BTX7 342 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 ST6GALNAC4Q9H4F1 302 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.29□□□□□ -0.6
SHMT2-224ENST00000556737 RAPGEFL1Q9UHV5 662 aa11.29□□□□□ -0.6
SHMT2-224ENST00000556737 C2CD4DB7Z1M9 353 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 TISP43B9A030 160 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 PODXLO00592 558 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
SHMT2-224ENST00000556737 ADAM12O43184 909 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 TGM5O43548 720 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 PPP6R2O75170 966 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 YEATS4O95619 227 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 F13A1P00488 732 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 C1RP00736 705 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 KRT18P05783 430 aaKnown RBP11.28□□□□□ -0.6
SHMT2-224ENST00000556737 ZSCAN22P10073 491 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-224ENST00000556737 FGFR3P22607 806 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 TXLNAP40222 546 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 GTF2BQ00403 316 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 CREMQ03060 361 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 E2F4Q16254 413 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-224ENST00000556737 TMEM31Q5JXX7 168 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 FAM171A1Q5VUB5 890 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-224ENST00000556737 RRAGBQ5VZM2 374 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 CES5AQ6NT32 575 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 LILRA6Q6PI73 481 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-224ENST00000556737 C15orf39Q6ZRI6 1047 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 DYMQ7RTS9 669 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 GPR149Q86SP6 731 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 SFR1Q86XK3 245 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 GLYCTKQ8IVS8 523 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-224ENST00000556737 DDX12PQ92771 950 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 ZNF707Q96C28 371 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-224ENST00000556737 DDX27Q96GQ7 796 aaKnown RBP11.28□□□□□ -0.6
SHMT2-224ENST00000556737 RIPOR3Q96MK2 946 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 ACAP3Q96P50 834 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 CLSTN3Q9BQT9 956 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 TCHPQ9BT92 498 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 STRA6Q9BX79 667 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 FGFBP2Q9BYJ0 223 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 IKZF4Q9H2S9 585 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 CCDC39Q9UFE4 941 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 TUBGCP4Q9UGJ1 667 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 FBXW11Q9UKB1 542 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-224ENST00000556737 TECTAO75443 2155 aa11.28□□□□□ -0.6
SHMT2-224ENST00000556737 A0A0B4J269 797 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 TTC26A0AVF1 554 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 FRMD3A2A2Y4 597 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 I3L4J1 428 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 SPTLC2O15270 562 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 CLDN3O15551 220 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 RFPL2O75678 378 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 B3GAT3O94766 335 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 ADRB2P07550 413 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 CLTAP09496 248 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 SPATA31D3P0C874 917 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 MYBP10242 640 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 COL9A1P20849 921 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 TKTP29401 623 aaKnown RBP11.27□□□□□ -0.61
SHMT2-224ENST00000556737 STAT6P42226 847 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 BRCC3P46736 316 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 LIG4P49917 911 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 NUCB2P80303 420 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 ELAVL2Q12926 359 aaKnown RBP11.27□□□□□ -0.61
SHMT2-224ENST00000556737 STK38Q15208 465 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 ENOX2Q16206 610 aaKnown RBP11.27□□□□□ -0.61
SHMT2-224ENST00000556737 PSMD5Q16401 504 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 DCLRE1AQ6PJP8 1040 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 SPATA31D4Q6ZUB0 917 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 PALB2Q86YC2 1186 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 HDAC7Q8WUI4 952 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 BICD1Q96G01 975 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 ZNF396Q96N95 335 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-224ENST00000556737 RHOBTB2Q9BYZ6 727 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 ZHX3Q9H4I2 956 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 SLC38A7Q9NVC3 462 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 TFIP11Q9UBB9 837 aaKnown RBP11.27□□□□□ -0.61
SHMT2-224ENST00000556737 MTRRQ9UBK8 725 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 SEL1LQ9UBV2 794 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 KMT2EQ8IZD2 1858 aa11.27□□□□□ -0.61
SHMT2-224ENST00000556737 PRR33A8MZF0 331 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 ANKRD63C9JTQ0 380 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 OGTO15294 1046 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 N4BP1O75113 896 aaKnown RBP11.26□□□□□ -0.61
SHMT2-224ENST00000556737 CASP5P51878 434 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 ZBTB6Q15916 424 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 PTPN21Q16825 1174 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 ATAT1Q5SQI0 421 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms