RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 KLHL10Q6JEL2 608 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 OTOP3Q7RTS5 596 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 MIER3Q7Z3K6 550 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 ST13P5Q8NFI4 369 aaPredicted RBP12.12□□□□□ -0.47
CHGA-205ENST00000556098 LRRC15Q8TF66 581 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 RSAD2Q8WXG1 361 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 RMDN1Q96DB5 314 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 PLIN2Q99541 437 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 RTP3Q9BQQ7 232 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 OLFML3Q9NRN5 406 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 PANK4Q9NVE7 773 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 LIMA1Q9UHB6 759 aaKnown RBP12.12□□□□□ -0.47
CHGA-205ENST00000556098 COL4A3BPQ9Y5P4 624 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 ITIH6Q6UXX5 1313 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 COL4A3Q01955 1670 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 EIF3DO15371 548 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHGA-205ENST00000556098 MAGEB2O15479 319 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 TBCAO75347 108 aaKnown RBP12.11□□□□□ -0.47
CHGA-205ENST00000556098 SLITRK3O94933 977 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 GNA14O95837 355 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 LMNAP02545 664 aaKnown RBP12.11□□□□□ -0.47
CHGA-205ENST00000556098 NPR3P17342 541 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 SCP2P22307 547 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 EIF4BP23588 611 aaKnown RBP12.11□□□□□ -0.47
CHGA-205ENST00000556098 CASP1P29466 404 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 ECM1Q16610 540 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 TTI2Q6NXR4 508 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 KCNK18Q7Z418 384 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 VSTM4Q8IW00 320 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 C4orf19Q8IY42 314 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 BCL7CQ8WUZ0 217 aaPredicted RBP12.11□□□□□ -0.47
CHGA-205ENST00000556098 EMILIN2Q9BXX0 1053 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 UNC45AQ9H3U1 944 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 KCNK12Q9HB15 430 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 DNAJB4Q9UDY4 337 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 SEPT9Q9UHD8 586 aaPredicted RBP12.11□□□□□ -0.47
CHGA-205ENST00000556098 KCNG1Q9UIX4 513 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 DUSP12Q9UNI6 340 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 PIN4Q9Y237 131 aaKnown RBP12.11□□□□□ -0.47
CHGA-205ENST00000556098 GDAQ9Y2T3 454 aa12.11□□□□□ -0.47
CHGA-205ENST00000556098 DMDP11532 3685 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 E9PMD0 336 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 DHX15O43143 795 aaKnown RBP12.1□□□□□ -0.47
CHGA-205ENST00000556098 OATP04181 439 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 DCNP07585 359 aaKnown RBP12.1□□□□□ -0.47
CHGA-205ENST00000556098 TPM1P09493 284 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 CTSAP10619 480 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 MAPTP10636 758 aaKnown RBP12.1□□□□□ -0.47
CHGA-205ENST00000556098 ATP1A3P13637 1013 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 IDEP14735 1019 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 GUCY2CP25092 1073 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 CLCN1P35523 988 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 QARSP47897 775 aaKnown RBP12.1□□□□□ -0.47
CHGA-205ENST00000556098 GPC3P51654 580 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 PSMC5P62195 406 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 TBC1D8BQ0IIM8 1120 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 BMT2Q1RMZ1 405 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 EDRF1Q3B7T1 1238 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 MTERF2Q49AM1 385 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 SPECC1LQ69YQ0 1117 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 KIAA0895Q8NCT3 520 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 SLC22A17Q8WUG5 538 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 IGSF21Q96ID5 467 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 FAM167AQ96KS9 214 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 CEP63Q96MT8 703 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 FAM193BQ96PV7 902 aaPredicted RBP12.1□□□□□ -0.47
CHGA-205ENST00000556098 SH2D3AQ9BRG2 576 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 LXNQ9BS40 222 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 ADAMTS10Q9H324 1103 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 NRDE2Q9H7Z3 1164 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 ANKEF1Q9NU02 776 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 USTQ9Y2C2 406 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 PPME1Q9Y570 386 aa12.1□□□□□ -0.47
CHGA-205ENST00000556098 PDCD11Q14690 1871 aaKnown RBP12.09□□□□□ -0.47
CHGA-205ENST00000556098 A0A0U1RQF3 1178 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 MEIS3P2A8K0S8 358 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 EML1O00423 815 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 CCP110O43303 1012 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 DARSP14868 501 aaKnown RBP12.09□□□□□ -0.47
CHGA-205ENST00000556098 SFPQP23246 707 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHGA-205ENST00000556098 SLC11A1P49279 550 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 ZNF131P52739 623 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 PRKCEQ02156 737 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 STK4Q13043 487 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 GIT2Q14161 759 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 KCNJ12Q14500 433 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 NR1I3Q14994 352 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 PTPN14Q15678 1187 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 TCP11X2Q5H9J9 407 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 NOMO2Q5JPE7 1267 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 GLB1LQ6UWU2 654 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 DYMQ7RTS9 669 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 CCDC186Q7Z3E2 898 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 GPR149Q86SP6 731 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 DDX53Q86TM3 631 aaKnown RBP12.09□□□□□ -0.47
CHGA-205ENST00000556098 PPFIBP1Q86W92 1011 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 GLYCTKQ8IVS8 523 aa12.09□□□□□ -0.47
CHGA-205ENST00000556098 SMYD4Q8IYR2 804 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms