RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 CEP120Q8N960 986 aa12.94□□□□□ -0.34
VRK1-204ENST00000555351 KRI1Q8N9T8 703 aaKnown RBP12.94□□□□□ -0.34
VRK1-204ENST00000555351 LRRC15Q8TF66 581 aa12.94□□□□□ -0.34
VRK1-204ENST00000555351 STAMQ92783 540 aa12.94□□□□□ -0.34
VRK1-204ENST00000555351 HVCN1Q96D96 273 aa12.94□□□□□ -0.34
VRK1-204ENST00000555351 CXCL16Q9H2A7 254 aa12.94□□□□□ -0.34
VRK1-204ENST00000555351 SEL1LQ9UBV2 794 aa12.94□□□□□ -0.34
VRK1-204ENST00000555351 TBX20Q9UMR3 447 aa12.94□□□□□ -0.34
VRK1-204ENST00000555351 SORCS3Q9UPU3 1222 aa12.94□□□□□ -0.34
VRK1-204ENST00000555351 BACE2Q9Y5Z0 518 aa12.94□□□□□ -0.34
VRK1-204ENST00000555351 CITO14578 2027 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 NPHP3-ACAD11A0A0J9YXS1 232 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 C2CD4DB7Z1M9 353 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 TBCAO75347 108 aaKnown RBP12.93□□□□□ -0.34
VRK1-204ENST00000555351 KRT18P05783 430 aaKnown RBP12.93□□□□□ -0.34
VRK1-204ENST00000555351 ADRB2P07550 413 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 PAX3P23760 479 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 CLCNKBP51801 687 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 GTF2BQ00403 316 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 RAB33AQ14088 237 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 MCM6Q14566 821 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 GLRA4Q5JXX5 417 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 CD300LGQ6UXG3 332 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 CCDC73Q6ZRK6 1079 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 ANKS3Q6ZW76 656 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 ZBTB33Q86T24 672 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 MAP4K3Q8IVH8 894 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 KREMEN2Q8NCW0 462 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 RABGGTAQ92696 567 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 EPSTI1Q96J88 318 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 ZBTB45Q96K62 511 aaPredicted RBP12.93□□□□□ -0.34
VRK1-204ENST00000555351 B3GALT6Q96L58 329 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 CLSTN3Q9BQT9 956 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 PRKD2Q9BZL6 878 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 WDR6Q9NNW5 1121 aaKnown RBP12.93□□□□□ -0.34
VRK1-204ENST00000555351 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 ANKFY1Q9P2R3 1169 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 MTRRQ9UBK8 725 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 FBXW11Q9UKB1 542 aa12.93□□□□□ -0.34
VRK1-204ENST00000555351 PDCD11Q14690 1871 aaKnown RBP12.93□□□□□ -0.34
VRK1-204ENST00000555351 TTC26A0AVF1 554 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 TMEM221A6NGB7 291 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 M0R296 226 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 HNRNPDLO14979 420 aaKnown RBP12.92□□□□□ -0.34
VRK1-204ENST00000555351 SYN3O14994 580 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 OGTO15294 1046 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 XPOTO43592 962 aaKnown RBP12.92□□□□□ -0.34
VRK1-204ENST00000555351 ZMYND10O75800 440 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 GAP43P17677 238 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 CYP3A5P20815 502 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 MARCKSP29966 332 aaPredicted RBP12.92□□□□□ -0.34
VRK1-204ENST00000555351 LIG4P49917 911 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 OSTNP61366 133 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 SOX4Q06945 474 aaPredicted RBP12.92□□□□□ -0.34
VRK1-204ENST00000555351 MTMR3Q13615 1198 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 SLC10A6Q3KNW5 377 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 RRAGBQ5VZM2 374 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 KANK3Q6NY19 840 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 PRSS55Q6UWB4 352 aaPredicted RBP12.92□□□□□ -0.34
VRK1-204ENST00000555351 CEP57Q86XR8 500 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 PALB2Q86YC2 1186 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 CD302Q8IX05 232 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 HASPINQ8TF76 798 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 ZNF707Q96C28 371 aaPredicted RBP12.92□□□□□ -0.34
VRK1-204ENST00000555351 BICD1Q96G01 975 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 ZNF396Q96N95 335 aaPredicted RBP12.92□□□□□ -0.34
VRK1-204ENST00000555351 ZMAT2Q96NC0 199 aaKnown RBP12.92□□□□□ -0.34
VRK1-204ENST00000555351 USP28Q96RU2 1077 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 FIZ1Q96SL8 496 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 CACNG4Q9UBN1 327 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 CDH22Q9UJ99 828 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 TRIP11Q15643 1979 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 C2orf16Q68DN1 1984 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 MYH15Q9Y2K3 1946 aa12.92□□□□□ -0.34
VRK1-204ENST00000555351 CLUHO75153 1309 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 A0A0B4J269 797 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 K7ENM7 598 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 PODXLO00592 558 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 FAM189A1O60320 539 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 PPP6R2O75170 966 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 YEATS4O95619 227 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 WEE2P0C1S8 567 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
VRK1-204ENST00000555351 DHX8Q14562 1220 aaKnown RBP12.91□□□□□ -0.34
VRK1-204ENST00000555351 ZBTB6Q15916 424 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 LIN9Q5TKA1 542 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 ATL3Q6DD88 541 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 SLFN12LQ6IEE8 588 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 SLC8B1Q6J4K2 584 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 FAM173BQ6P4H8 233 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 HFE2Q6ZVN8 426 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 USP49Q70CQ1 688 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 SV2BQ7L1I2 683 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 HSCBQ8IWL3 235 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 LINC00301Q8NCQ3 95 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 C3orf58Q8NDZ4 430 aa12.91□□□□□ -0.34
VRK1-204ENST00000555351 SMG7Q92540 1137 aaKnown RBP12.91□□□□□ -0.34
VRK1-204ENST00000555351 NXPE3Q969Y0 559 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms