RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 UNC13DQ70J99 1090 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 PPFIBP1Q86W92 1011 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 HASPINQ8TF76 798 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
SRP54-206ENST00000555317 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
SRP54-206ENST00000555317 KIF12Q96FN5 646 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 DDX27Q96GQ7 796 aaKnown RBP13.18□□□□□ -0.3
SRP54-206ENST00000555317 VN1R3Q9BXE9 311 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 EXOC1Q9NV70 894 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 CACNG4Q9UBN1 327 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 CD207Q9UJ71 328 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 IRAK3Q9Y616 596 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 PVALEFA0A1B0GWK0 134 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 F8W810 466 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 ACTN4O43707 911 aaKnown RBP13.17□□□□□ -0.3
SRP54-206ENST00000555317 B3GAT3O94766 335 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 MYL1P05976 194 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 ADH1AP07327 375 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 KLRC2P26717 231 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 TNFSF9P41273 254 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 CASP5P51878 434 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 NDUFA8P51970 172 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 CTC1Q2NKJ3 1217 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 SLC10A6Q3KNW5 377 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 XKR4Q5GH76 650 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 SLC39A4Q6P5W5 647 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 DCLRE1AQ6PJP8 1040 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 ALKAL1Q6UXT8 129 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 CEP57Q86XR8 500 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 CD302Q8IX05 232 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 GRAMD1CQ8IYS0 662 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 ADAMTS19Q8TE59 1207 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 CASP10Q92851 521 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 PAGE5Q96GU1 130 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 PAAF1Q9BRP4 392 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 HAPLN2Q9GZV7 340 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 CXCL16Q9H2A7 254 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 GOLGA2P5Q9HBQ8 144 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 BARX2Q9UMQ3 279 aaPredicted RBP13.17□□□□□ -0.3
SRP54-206ENST00000555317 HPSEQ9Y251 543 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 NUB1Q9Y5A7 615 aa13.17□□□□□ -0.3
SRP54-206ENST00000555317 UBE4BO95155 1302 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 TISP43B9A030 160 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 ANKRD63C9JTQ0 380 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 PODXLO00592 558 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 EIF3DO15371 548 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRP54-206ENST00000555317 CLASP2O75122 1294 aaKnown RBP13.16□□□□□ -0.3
SRP54-206ENST00000555317 TBX10O75333 385 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 PRPF6O94906 941 aaKnown RBP13.16□□□□□ -0.3
SRP54-206ENST00000555317 CASP1P29466 404 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 RPL9P32969 192 aaKnown RBP13.16□□□□□ -0.3
SRP54-206ENST00000555317 ACOT2P49753 483 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 CLCNKBP51801 687 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 DSG1Q02413 1049 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 KCNA1Q09470 495 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 CUL4BQ13620 913 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 NAB2Q15742 525 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 ENOX2Q16206 610 aaKnown RBP13.16□□□□□ -0.3
SRP54-206ENST00000555317 UPP1Q16831 310 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 FAM171A1Q5VUB5 890 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 ARMCX5Q6P1M9 558 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 PDXDC1Q6P996 788 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 RIN2Q8WYP3 895 aaPredicted RBP13.16□□□□□ -0.3
SRP54-206ENST00000555317 HPS3Q969F9 1004 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 C18orf25Q96B23 403 aaPredicted RBP13.16□□□□□ -0.3
SRP54-206ENST00000555317 ZMAT2Q96NC0 199 aaKnown RBP13.16□□□□□ -0.3
SRP54-206ENST00000555317 TSPAN18Q96SJ8 248 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 TTPALQ9BTX7 342 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 STRA6Q9BX79 667 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 GPR62Q9BZJ7 368 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRP54-206ENST00000555317 DZANK1Q9NVP4 752 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 UBQLN1Q9UMX0 589 aaKnown RBP13.16□□□□□ -0.3
SRP54-206ENST00000555317 STYXL1Q9Y6J8 313 aa13.16□□□□□ -0.3
SRP54-206ENST00000555317 TTC26A0AVF1 554 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 LACTBL1A8MY62 500 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 KIAA0391O15091 583 aaKnown RBP13.15□□□□□ -0.3
SRP54-206ENST00000555317 IL18RAPO95256 599 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 GLP2RO95838 553 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.3
SRP54-206ENST00000555317 HOXB8P17481 243 aaPredicted RBP13.15□□□□□ -0.3
SRP54-206ENST00000555317 GARTP22102 1010 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 LTBRP36941 435 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 SPAG1Q07617 926 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 DLX2Q07687 328 aaPredicted RBP13.15□□□□□ -0.3
SRP54-206ENST00000555317 SMAD4Q13485 552 aaKnown RBP13.15□□□□□ -0.3
SRP54-206ENST00000555317 TMEM132DQ14C87 1099 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
SRP54-206ENST00000555317 HS2ST1Q7LGA3 356 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 TAS1R1Q7RTX1 841 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 BEST2Q8NFU1 509 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 B3GALT6Q96L58 329 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 UHRF1Q96T88 793 aaPredicted RBP13.15□□□□□ -0.3
SRP54-206ENST00000555317 FAM213AQ9BRX8 229 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 FGFBP2Q9BYJ0 223 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 DPP7Q9UHL4 492 aa13.15□□□□□ -0.3
SRP54-206ENST00000555317 CPSF3Q9UKF6 684 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms