RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 RAB33AQ14088 237 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 PSMD5Q16401 504 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 ZNF568Q3ZCX4 644 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 GLRA4Q5JXX5 417 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 MPZL3Q6UWV2 235 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 ZPBP2Q6X784 338 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 RTL10Q7L3V2 364 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 NXPE3Q969Y0 559 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 CALML4Q96GE6 196 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 ZMAT2Q96NC0 199 aaKnown RBP12.18□□□□□ -0.46
ABCD4-221ENST00000554453 KCNK12Q9HB15 430 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 PIDD1Q9HB75 910 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 SLC38A7Q9NVC3 462 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.18□□□□□ -0.46
ABCD4-221ENST00000554453 LARSQ9P2J5 1176 aaKnown RBP12.18□□□□□ -0.46
ABCD4-221ENST00000554453 EPS15L1Q9UBC2 864 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 H0YCG3 227 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 ADAM12O43184 909 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 PDGFBP01127 241 aaPredicted RBP12.17□□□□□ -0.46
ABCD4-221ENST00000554453 HNRNPA1P09651 372 aaKnown RBP eCLIP12.17□□□□□ -0.46
ABCD4-221ENST00000554453 PDCP20941 246 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 RPL9P32969 192 aaKnown RBP12.17□□□□□ -0.46
ABCD4-221ENST00000554453 OR1D2P34982 312 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 LONP1P36776 959 aaKnown RBP12.17□□□□□ -0.46
ABCD4-221ENST00000554453 SOX4Q06945 474 aaPredicted RBP12.17□□□□□ -0.46
ABCD4-221ENST00000554453 SF3A1Q15459 793 aaKnown RBP12.17□□□□□ -0.46
ABCD4-221ENST00000554453 SLC10A6Q3KNW5 377 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 SNX27Q96L92 541 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 MYADMQ96S97 322 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 CCSER1Q9C0I3 900 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 BLOC1S4Q9NUP1 217 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 CNTN3Q9P232 1028 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 MTRRQ9UBK8 725 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 FBXW11Q9UKB1 542 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 ODF2LQ9ULJ1 636 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 BACE2Q9Y5Z0 518 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 F5P12259 2224 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 DENND4AQ7Z401 1863 aa12.17□□□□□ -0.46
ABCD4-221ENST00000554453 NOTCH4Q99466 2003 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 CLUHO75153 1309 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 NPHP3-ACAD11A0A0J9YXS1 232 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 CLDN3O15551 220 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 LAMP2P13473 410 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 SCP2P22307 547 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 HOXA9P31269 272 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 GBP2P32456 591 aaPredicted RBP12.16□□□□□ -0.46
ABCD4-221ENST00000554453 DDIT3P35638 169 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 BRCC3P46736 316 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 VCPP55072 806 aaKnown RBP12.16□□□□□ -0.46
ABCD4-221ENST00000554453 NCKAP1LP55160 1127 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 MCL1Q07820 350 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 RSPO2Q6UXX9 243 aaPredicted RBP12.16□□□□□ -0.46
ABCD4-221ENST00000554453 ANKS3Q6ZW76 656 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 HAUS6Q7Z4H7 955 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 ALYREFQ86V81 257 aaKnown RBP12.16□□□□□ -0.46
ABCD4-221ENST00000554453 SLC44A3Q8N4M1 653 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 C3orf58Q8NDZ4 430 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 PRSS33Q8NF86 280 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 SMOC2Q9H3U7 446 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 PLEKHA5Q9HAU0 1116 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 GOLGA2P5Q9HBQ8 144 aa12.16□□□□□ -0.46
ABCD4-221ENST00000554453 ZFP37Q9Y6Q3 630 aaPredicted RBP12.16□□□□□ -0.46
ABCD4-221ENST00000554453 CACNA1IQ9P0X4 2223 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 PODXLO00592 558 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 MEFVO15553 781 aaPredicted RBP12.15□□□□□ -0.46
ABCD4-221ENST00000554453 TBC1D4O60343 1298 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 POU2F2P09086 479 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 CLTAP09496 248 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 TKTP29401 623 aaKnown RBP12.15□□□□□ -0.46
ABCD4-221ENST00000554453 CLCN5P51795 746 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 ZNF131P52739 623 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 PTPN5P54829 565 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 GRIN1Q05586 938 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 TCF15Q12870 199 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 MRPL58Q14197 206 aaKnown RBP12.15□□□□□ -0.46
ABCD4-221ENST00000554453 MCM6Q14566 821 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 NOLC1Q14978 699 aaKnown RBP eCLIP12.15□□□□□ -0.46
ABCD4-221ENST00000554453 PTPAQ15257 358 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 ZBTB6Q15916 424 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 PPM1LQ5SGD2 360 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 AXDND1Q5T1B0 1012 aaPredicted RBP12.15□□□□□ -0.46
ABCD4-221ENST00000554453 LIN9Q5TKA1 542 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 GPBP1Q86WP2 473 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 MYCT1Q8N699 235 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 ZNF461Q8TAF7 563 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 LRRC15Q8TF66 581 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
ABCD4-221ENST00000554453 BACH2Q9BYV9 841 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 HAPLN2Q9GZV7 340 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 IRF2BPLQ9H1B7 796 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 WNT16Q9UBV4 365 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 DUSP12Q9UNI6 340 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 FAM186AA6NE01 2351 aa12.15□□□□□ -0.46
ABCD4-221ENST00000554453 TTC26A0AVF1 554 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 ANHXE9PGG2 379 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 SYN3O14994 580 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 TRAK2O60296 914 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 XYLBO75191 536 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 ABLIM3O94929 683 aa12.14□□□□□ -0.47
ABCD4-221ENST00000554453 PIGRP01833 764 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms