RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ATF7P17544 494 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 AKAP5P24588 427 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 MLH1P40692 756 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 OR1G1P47890 313 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 NCKAP1LP55160 1127 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 BCAR1P56945 870 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 ASIC1P78348 528 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 GRIK3Q13003 919 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 ALCAMQ13740 583 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 ARSHQ5FYA8 562 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 ADALQ6DHV7 355 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 MPZL3Q6UWV2 235 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 ZPBP2Q6X784 338 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 EP400NLQ6ZTU2 488 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 TMC7Q7Z402 723 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 SPRED2Q7Z698 418 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 SMG8Q8ND04 991 aaKnown RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 TMEM161BQ8NDZ6 487 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 LEO1Q8WVC0 666 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 MRPS27Q92552 414 aaKnown RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 GAD1Q99259 594 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 ACO2Q99798 780 aaKnown RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 TMEM175Q9BSA9 504 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 TARS2Q9BW92 718 aaKnown RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 COLEC11Q9BWP8 271 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 CCDC113Q9H0I3 377 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 NXF3Q9H4D5 531 aaKnown RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 CWH43Q9H720 699 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 MRPL44Q9H9J2 332 aaKnown RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 ENTPD7Q9NQZ7 604 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 TLR9Q9NR96 1032 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 PANK4Q9NVE7 773 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 TBC1D13Q9NVG8 400 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 ANKFY1Q9P2R3 1169 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 USP25Q9UHP3 1055 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 KCNH3Q9ULD8 1083 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 COG5Q9UP83 839 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 PLAGL2Q9UPG8 496 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 LZTS1Q9Y250 596 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 FAN1Q9Y2M0 1017 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 GDAQ9Y2T3 454 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 HES2Q9Y543 173 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 TTC3P53804 2025 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 ZMYM2Q9UBW7 1377 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 ARL5CA6NH57 179 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 RBAK-RBAKDNI3L0D1 243 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 GRM6O15303 877 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 GCNT3O95395 438 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 ITGB1P05556 798 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 THP07101 528 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 SERPINB4P48594 390 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 SCNN1GP51170 649 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 ZNF131P52739 623 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 PLCB3Q01970 1234 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 NOLC1Q14978 699 aaKnown RBP eCLIP9.11□□□□□ -0.95
PSEN1-209ENST00000553855 NT5DC1Q5TFE4 455 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 RESP18Q5W5W9 173 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 SLFN12LQ6IEE8 588 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 SHC4Q6S5L8 630 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 SYCP3Q8IZU3 236 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 SPPL3Q8TCT6 385 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 HVCN1Q96D96 273 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 ACAP3Q96P50 834 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 ACCSQ96QU6 501 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 C1QTNF2Q9BXJ5 285 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 NGRNQ9NPE2 291 aaKnown RBP9.11□□□□□ -0.95
PSEN1-209ENST00000553855 RNF19AQ9NV58 838 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 SNTG2Q9NY99 539 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 KLK14Q9P0G3 267 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 THEGQ9P2T0 379 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 TBX20Q9UMR3 447 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 FCF1Q9Y324 198 aaKnown RBP9.11□□□□□ -0.95
PSEN1-209ENST00000553855 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-209ENST00000553855 GBF1Q92538 1859 aa9.11□□□□□ -0.95
PSEN1-209ENST00000553855 MYMKA6NI61 221 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 ESPNB1AK53 854 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 NT5C1B-RDH14C9J2C7 533 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 XPOTO43592 962 aaKnown RBP9.1□□□□□ -0.95
PSEN1-209ENST00000553855 PRMT3O60678 531 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 TADA2AO75478 443 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 RECQL4O94761 1208 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 GALTP07902 379 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 CMA1P23946 247 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 GRM5P41594 1212 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 SYKP43405 635 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 OSTNP61366 133 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 HSP90AA2PQ14568 343 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-209ENST00000553855 SMC1AQ14683 1233 aaKnown RBP9.1□□□□□ -0.95
PSEN1-209ENST00000553855 POSTNQ15063 836 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 AXDND1Q5T1B0 1012 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-209ENST00000553855 EEF1DP3Q658K8 133 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 KIAA1841Q6NSI8 718 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 LRRC55Q6ZSA7 311 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 SFR1Q86XK3 245 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.1□□□□□ -0.95
PSEN1-209ENST00000553855 SLC39A11Q8N1S5 342 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 CDT1Q9H211 546 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 IGFLR1Q9H665 355 aa9.1□□□□□ -0.95
PSEN1-209ENST00000553855 NRDE2Q9H7Z3 1164 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms