RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 UPP1Q16831 310 aa19.37■□□□□ 0.69
FOXN3-204ENST00000553840 ALKAL1Q6UXT8 129 aa19.37■□□□□ 0.69
FOXN3-204ENST00000553840 SUGP1Q8IWZ8 645 aaKnown RBP19.37■□□□□ 0.69
FOXN3-204ENST00000553840 PIAS4Q8N2W9 510 aaPredicted RBP19.37■□□□□ 0.69
FOXN3-204ENST00000553840 KREMEN2Q8NCW0 462 aa19.37■□□□□ 0.69
FOXN3-204ENST00000553840 LNX1Q8TBB1 728 aaPredicted RBP19.37■□□□□ 0.69
FOXN3-204ENST00000553840 SMG7Q92540 1137 aaKnown RBP19.37■□□□□ 0.69
FOXN3-204ENST00000553840 SNX27Q96L92 541 aa19.37■□□□□ 0.69
FOXN3-204ENST00000553840 KCNH6Q9H252 994 aa19.37■□□□□ 0.69
FOXN3-204ENST00000553840 ZSCAN16Q9H4T2 348 aaPredicted RBP19.37■□□□□ 0.69
FOXN3-204ENST00000553840 LIMD1Q9UGP4 676 aa19.37■□□□□ 0.69
FOXN3-204ENST00000553840 PDCD11Q14690 1871 aaKnown RBP19.37■□□□□ 0.69
FOXN3-204ENST00000553840 TECTAO75443 2155 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 VWA8A3KMH1 1905 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 MYBP10242 640 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 KCNE1P15382 129 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 DDIT3P35638 169 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 GRIN1Q05586 938 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 MCM6Q14566 821 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 LIN9Q5TKA1 542 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 LILRA6Q6PI73 481 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 ZBTB45Q96K62 511 aaPredicted RBP19.36■□□□□ 0.69
FOXN3-204ENST00000553840 ZHX3Q9H4I2 956 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 BLOC1S4Q9NUP1 217 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 CNTN3Q9P232 1028 aa19.36■□□□□ 0.69
FOXN3-204ENST00000553840 K7ENM7 598 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 ABLIM1O14639 778 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 TRAK2O60296 914 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 RFPL2O75678 378 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 FGFR3P22607 806 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 MARCKSP29966 332 aaPredicted RBP19.35■□□□□ 0.69
FOXN3-204ENST00000553840 RPL9P32969 192 aaKnown RBP19.35■□□□□ 0.69
FOXN3-204ENST00000553840 LIG4P49917 911 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 CEBPZQ03701 1054 aaKnown RBP19.35■□□□□ 0.69
FOXN3-204ENST00000553840 MCL1Q07820 350 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 RESTQ13127 1097 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 PTPAQ15257 358 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 KYAT1Q16773 422 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 KRI1Q8N9T8 703 aaKnown RBP19.35■□□□□ 0.69
FOXN3-204ENST00000553840 KCNN1Q92952 543 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 GOLGA2P5Q9HBQ8 144 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 WDR6Q9NNW5 1121 aaKnown RBP19.35■□□□□ 0.69
FOXN3-204ENST00000553840 FOXD4L1Q9NU39 408 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 STK17AQ9UEE5 414 aa19.35■□□□□ 0.69
FOXN3-204ENST00000553840 SRPRBQ9Y5M8 271 aaKnown RBP19.35■□□□□ 0.69
FOXN3-204ENST00000553840 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.35■□□□□ 0.69
FOXN3-204ENST00000553840 PODXLO00592 558 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 HNRNPDLO14979 420 aaKnown RBP19.34■□□□□ 0.69
FOXN3-204ENST00000553840 STX6O43752 255 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 ZMYND10O75800 440 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 CLTAP09496 248 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 ZNF131P52739 623 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 ANKS3Q6ZW76 656 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 EPSTI1Q96J88 318 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 CLSTN3Q9BQT9 956 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 PRKD2Q9BZL6 878 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 PLEKHA5Q9HAU0 1116 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 FBXO2Q9UK22 296 aaPredicted RBP19.34■□□□□ 0.69
FOXN3-204ENST00000553840 TBX20Q9UMR3 447 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 NUB1Q9Y5A7 615 aa19.34■□□□□ 0.69
FOXN3-204ENST00000553840 CLUHO75153 1309 aa19.33■□□□□ 0.69
FOXN3-204ENST00000553840 GBP2P32456 591 aaPredicted RBP19.33■□□□□ 0.68
FOXN3-204ENST00000553840 SOX4Q06945 474 aaPredicted RBP19.33■□□□□ 0.68
FOXN3-204ENST00000553840 SPECC1Q5M775 1068 aa19.33■□□□□ 0.68
FOXN3-204ENST00000553840 PPM1LQ5SGD2 360 aa19.33■□□□□ 0.68
FOXN3-204ENST00000553840 FBXL6Q8N531 539 aa19.33■□□□□ 0.68
FOXN3-204ENST00000553840 ZMAT2Q96NC0 199 aaKnown RBP19.33■□□□□ 0.68
FOXN3-204ENST00000553840 FBXW11Q9UKB1 542 aa19.33■□□□□ 0.68
FOXN3-204ENST00000553840 MYH15Q9Y2K3 1946 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 XPOTO43592 962 aaKnown RBP19.32■□□□□ 0.68
FOXN3-204ENST00000553840 PAPLNO95428 1278 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 ASGR2P07307 311 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 HNRNPA1P09651 372 aaKnown RBP eCLIP19.32■□□□□ 0.684e-7■■■■□ 19.5
FOXN3-204ENST00000553840 PDIA4P13667 645 aaKnown RBP19.32■□□□□ 0.68
FOXN3-204ENST00000553840 TKTP29401 623 aaKnown RBP19.32■□□□□ 0.68
FOXN3-204ENST00000553840 OR1D2P34982 312 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 PPP2R3AQ06190 1150 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 RAB33AQ14088 237 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 SLC10A6Q3KNW5 377 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 SEZ6Q53EL9 994 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 RRAGBQ5VZM2 374 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 FAM173BQ6P4H8 233 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 C3orf58Q8NDZ4 430 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 FEZF2Q8TBJ5 459 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 ZNF707Q96C28 371 aaPredicted RBP19.32■□□□□ 0.68
FOXN3-204ENST00000553840 IGSF9Q9P2J2 1179 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 MTRRQ9UBK8 725 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 MTMR6Q9Y217 621 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 BACE2Q9Y5Z0 518 aa19.32■□□□□ 0.68
FOXN3-204ENST00000553840 I3L4J1 428 aa19.31■□□□□ 0.68
FOXN3-204ENST00000553840 SYN3O14994 580 aa19.31■□□□□ 0.68
FOXN3-204ENST00000553840 PIGRP01833 764 aa19.31■□□□□ 0.68
FOXN3-204ENST00000553840 C8AP07357 584 aa19.31■□□□□ 0.68
FOXN3-204ENST00000553840 HSP90AA1P07900 732 aaKnown RBP19.31■□□□□ 0.68
FOXN3-204ENST00000553840 BRCC3P46736 316 aa19.31■□□□□ 0.68
FOXN3-204ENST00000553840 SLC39A14Q15043 492 aa19.31■□□□□ 0.68
FOXN3-204ENST00000553840 UVSSAQ2YD98 709 aa19.31■□□□□ 0.68
FOXN3-204ENST00000553840 CCDC73Q6ZRK6 1079 aa19.31■□□□□ 0.68
FOXN3-204ENST00000553840 SV2BQ7L1I2 683 aa19.31■□□□□ 0.68
FOXN3-204ENST00000553840 RTL10Q7L3V2 364 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms