RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 HES2Q9Y543 173 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 PCDHB2Q9Y5E7 798 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 UMODL1Q5DID0 1318 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 RBAK-RBAKDNI3L0D1 243 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 EPHB6O15197 1021 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 MGEA5O60502 916 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 NBNO60934 754 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 MFAP3LO75121 409 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 ZNF623O75123 536 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 PHACTR2O75167 634 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 NOL4O94818 638 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 TNNC2P02585 160 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 NFICP08651 508 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 CLTBP09497 229 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 TMEM191BP0C7N4 346 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 ACTN1P12814 892 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 AKAP5P24588 427 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 KRT9P35527 623 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 ADKP55263 362 aaKnown RBP12.7□□□□□ -0.38
NEK9-202ENST00000553823 TFAMQ00059 246 aaKnown RBP12.7□□□□□ -0.38
NEK9-202ENST00000553823 GOLGA8FQ08AF8 430 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 GOLGA8DPQ0D2H9 430 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 ARID5BQ14865 1188 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 TMEM132DQ14C87 1099 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 HS1BP3Q53T59 392 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 JADE1Q6IE81 842 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 DPY19L2P1Q6NXN4 242 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 FAM43BQ6ZT52 329 aaPredicted RBP12.7□□□□□ -0.38
NEK9-202ENST00000553823 CACNA2D4Q7Z3S7 1137 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 LRRC8AQ8IWT6 810 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 EFCAB13Q8IY85 973 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 TC2NQ8N9U0 490 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 ZNF397Q8NF99 534 aaPredicted RBP12.7□□□□□ -0.38
NEK9-202ENST00000553823 CACTINQ8WUQ7 758 aaKnown RBP12.7□□□□□ -0.38
NEK9-202ENST00000553823 SEMA4DQ92854 862 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 ADAM2Q99965 735 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 FTHL17Q9BXU8 183 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 GANQ9H2C0 597 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 SIX2Q9NPC8 291 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 TMEM39AQ9NV64 488 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 RAB20Q9NX57 234 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 CEP72Q9P209 647 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 PARP2Q9UGN5 583 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 FBXL5Q9UKA1 691 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 DERAQ9Y315 318 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 C2CD2Q9Y426 696 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 DAAM1Q9Y4D1 1078 aa12.7□□□□□ -0.38
NEK9-202ENST00000553823 A0A0U1RQF3 1178 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 RNF225M0QZC1 329 aaPredicted RBP12.69□□□□□ -0.38
NEK9-202ENST00000553823 HLA-DRAP01903 254 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 SKIP12755 728 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 ITGA4P13612 1032 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 UCHL3P15374 230 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 EN2P19622 333 aaPredicted RBP12.69□□□□□ -0.38
NEK9-202ENST00000553823 PIK3CAP42336 1068 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 POLR2FP61218 127 aaKnown RBP12.69□□□□□ -0.38
NEK9-202ENST00000553823 ZBED6P86452 979 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 APBA1Q02410 837 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 GPNMBQ14956 572 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 PLEKHG4Q58EX7 1191 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 ALKAL1Q6UXT8 129 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 MRPL10Q7Z7H8 261 aaKnown RBP12.69□□□□□ -0.38
NEK9-202ENST00000553823 SEPT8Q92599 483 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 KIF12Q96FN5 646 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 PANX2Q96RD6 677 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 TSPAN18Q96SJ8 248 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 PPP1R12CQ9BZL4 782 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 MTMR12Q9C0I1 747 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 WNT8AQ9H1J5 351 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 CNTN3Q9P232 1028 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 APEX2Q9UBZ4 518 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 SCN1AP35498 2009 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 TTC3P53804 2025 aa12.69□□□□□ -0.38
NEK9-202ENST00000553823 MICAL3Q7RTP6 2002 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 ZC3H11AO75152 810 aaKnown RBP eCLIP12.68□□□□□ -0.38
NEK9-202ENST00000553823 LRRN2O75325 713 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 VNN1O95497 513 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 RFX1P22670 979 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 CYP2C18P33260 490 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 CCL23P55773 120 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 LRMPQ12912 555 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 NCOA4Q13772 614 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 TSR1Q2NL82 804 aaKnown RBP12.68□□□□□ -0.38
NEK9-202ENST00000553823 XKR4Q5GH76 650 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 WDR44Q5JSH3 913 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 UBE2Q1Q7Z7E8 422 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 DBF4BQ8NFT6 615 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 OR8K1Q8NGG5 319 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 BAP1Q92560 729 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 APBB2Q92870 758 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 PGBD4Q96DM1 585 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 SCLYQ96I15 445 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 NT5C1BQ96P26 610 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 NUCKS1Q9H1E3 243 aaKnown RBP12.68□□□□□ -0.38
NEK9-202ENST00000553823 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
NEK9-202ENST00000553823 NLRC4Q9NPP4 1024 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 RGS18Q9NS28 235 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 KLK14Q9P0G3 267 aa12.68□□□□□ -0.38
NEK9-202ENST00000553823 FHOD1Q9Y613 1164 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms