RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 STOX1Q6ZVD7 989 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 TP53INP2Q8IXH6 220 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 FEZF2Q8TBJ5 459 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 MICAL1Q8TDZ2 1067 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ATRIPQ8WXE1 791 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ZBTB10Q96DT7 871 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 PIGSQ96S52 555 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 GPR20Q99678 358 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 USP26Q9BXU7 913 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 LNPKQ9C0E8 428 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 MAF1Q9H063 256 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 FAM49AQ9H0Q0 323 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 EHMT1Q9H9B1 1298 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 CYP26B1Q9NR63 512 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 DIAPH3Q9NSV4 1193 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ZSWIM5Q9P217 1185 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 FBXO4Q9UKT5 387 aa6.38□□□□□ -1.39
SMARCE1P3-201ENST00000553649 MYH6P13533 1939 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 MEGF11A6BM72 1044 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 H3BRJ5 948 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ENPP3O14638 875 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 EOMESO95936 686 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 TOP3BO95985 862 aaKnown RBP6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 SRGAP2BP0DMP2 458 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ACPPP15309 386 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 JUNBP17275 347 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 SDSP20132 328 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 CD52P31358 61 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ADMP35318 185 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 GATMP50440 423 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ADAM17P78536 824 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 KCNA1Q09470 495 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 TMEM62Q0P6H9 643 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 NEDD9Q14511 834 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 LPIN1Q14693 890 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 SPOUT1Q5T280 376 aaKnown RBP6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ZNF648Q5T619 568 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 SPOCD1Q6ZMY3 1216 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 RSPH3Q86UC2 560 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 DNAJB3Q8WWF6 145 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 LINC01599Q8WXQ3 324 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 GLG1Q92896 1179 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 OSBPL1AQ9BXW6 950 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 KRT23Q9C075 422 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 KCNK12Q9HB15 430 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 RXFP3Q9NSD7 469 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 SEMA4GQ9NTN9 838 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ZSCAN32Q9NX65 697 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 MAD2L2Q9UI95 211 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 CA14Q9ULX7 337 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 SIT1Q9Y3P8 196 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 CDY2AQ9Y6F7 541 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 TTC3P53804 2025 aa6.37□□□□□ -1.39
SMARCE1P3-201ENST00000553649 NRCAMQ92823 1304 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 DMXL2Q8TDJ6 3036 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 FIBPO43427 364 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 LRP3O75074 770 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 KCNK5O95279 499 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 PAPLNO95428 1278 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 TCF7P36402 384 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 MTHFRP42898 656 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 MRPS9P82933 396 aaKnown RBP6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 CSTF1Q05048 431 aaKnown RBP6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ITIH3Q06033 890 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 MGAT3Q09327 533 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 ZNF124Q15973 351 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 CSRP2Q16527 193 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 LPAL2Q16609 132 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 SLC35G1Q2M3R5 365 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 FBLN7Q53RD9 439 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 FBXO47Q5MNV8 452 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 IL31Q6EBC2 164 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 CES5AQ6NT32 575 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 TAF2Q6P1X5 1199 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 FDX2Q6P4F2 183 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 USP17L6PQ6QN14 398 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 C19orf48Q6RUI8 117 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 SMARCC2Q8TAQ2 1214 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 YTHDC1Q96MU7 727 aaKnown RBP6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 INPP4AQ96PE3 977 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 FOXQ1Q9C009 403 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 AGO3Q9H9G7 860 aaKnown RBP6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 OSGEPQ9NPF4 335 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 MAP3K20Q9NYL2 800 aaKnown RBP6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 TUBE1Q9UJT0 475 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 GINS2Q9Y248 185 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 LZTS1Q9Y250 596 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 FREM2Q5SZK8 3169 aa6.36□□□□□ -1.39
SMARCE1P3-201ENST00000553649 AKAP13Q12802 2813 aa6.35□□□□□ -1.39
SMARCE1P3-201ENST00000553649 KAT6AQ92794 2004 aa6.35□□□□□ -1.39
SMARCE1P3-201ENST00000553649 PNMA6FA0A0J9YX94 578 aa6.35□□□□□ -1.39
SMARCE1P3-201ENST00000553649 HIDE1A8MVS5 230 aa6.35□□□□□ -1.39
SMARCE1P3-201ENST00000553649 IFIT3O14879 490 aaKnown RBP6.35□□□□□ -1.39
SMARCE1P3-201ENST00000553649 LAMTOR5O43504 91 aa6.35□□□□□ -1.39
SMARCE1P3-201ENST00000553649 CYTH3O43739 400 aa6.35□□□□□ -1.39
SMARCE1P3-201ENST00000553649 GAS2O43903 313 aaKnown RBP6.35□□□□□ -1.39
SMARCE1P3-201ENST00000553649 TIAF1O95411 115 aa6.35□□□□□ -1.39
SMARCE1P3-201ENST00000553649 DLGAP3O95886 979 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms