RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 PAPLNO95428 1278 aa25.29■■□□□ 1.64
TROAP-216ENST00000551567 FGFR3P22607 806 aa25.29■■□□□ 1.64
TROAP-216ENST00000551567 PDXDC1Q6P996 788 aa25.29■■□□□ 1.64
TROAP-216ENST00000551567 CD300LGQ6UXG3 332 aa25.29■■□□□ 1.64
TROAP-216ENST00000551567 GET4Q7L5D6 327 aaPredicted RBP25.29■■□□□ 1.64
TROAP-216ENST00000551567 TMEM161BQ8NDZ6 487 aa25.29■■□□□ 1.64
TROAP-216ENST00000551567 SPIRE2Q8WWL2 714 aa25.29■■□□□ 1.64
TROAP-216ENST00000551567 RSAD2Q8WXG1 361 aa25.29■■□□□ 1.64
TROAP-216ENST00000551567 ACAP3Q96P50 834 aa25.29■■□□□ 1.64
TROAP-216ENST00000551567 MFSD1Q9H3U5 465 aa25.29■■□□□ 1.64
TROAP-216ENST00000551567 MAPTP10636 758 aaKnown RBP25.28■■□□□ 1.64
TROAP-216ENST00000551567 TKTP29401 623 aaKnown RBP25.28■■□□□ 1.64
TROAP-216ENST00000551567 BRCC3P46736 316 aa25.28■■□□□ 1.64
TROAP-216ENST00000551567 SMTNP53814 917 aa25.28■■□□□ 1.64
TROAP-216ENST00000551567 XKR4Q5GH76 650 aa25.28■■□□□ 1.64
TROAP-216ENST00000551567 ALKAL1Q6UXT8 129 aa25.28■■□□□ 1.64
TROAP-216ENST00000551567 KCTD17Q8N5Z5 321 aa25.28■■□□□ 1.64
TROAP-216ENST00000551567 ZMAT2Q96NC0 199 aaKnown RBP25.28■■□□□ 1.64
TROAP-216ENST00000551567 PHOX2BQ99453 314 aa25.28■■□□□ 1.64
TROAP-216ENST00000551567 NTPCRQ9BSD7 190 aaKnown RBP25.28■■□□□ 1.64
TROAP-216ENST00000551567 IGSF9Q9P2J2 1179 aa25.28■■□□□ 1.64
TROAP-216ENST00000551567 DUSP12Q9UNI6 340 aa25.28■■□□□ 1.64
TROAP-216ENST00000551567 C8AP07357 584 aa25.27■■□□□ 1.64
TROAP-216ENST00000551567 OR1D2P34982 312 aa25.27■■□□□ 1.64
TROAP-216ENST00000551567 NOLC1Q14978 699 aaKnown RBP eCLIP25.27■■□□□ 1.64
TROAP-216ENST00000551567 SEZ6Q53EL9 994 aa25.27■■□□□ 1.64
TROAP-216ENST00000551567 PPM1LQ5SGD2 360 aa25.27■■□□□ 1.64
TROAP-216ENST00000551567 AK8Q96MA6 479 aa25.27■■□□□ 1.64
TROAP-216ENST00000551567 SLC38A7Q9NVC3 462 aa25.27■■□□□ 1.64
TROAP-216ENST00000551567 KCND2Q9NZV8 630 aa25.27■■□□□ 1.64
TROAP-216ENST00000551567 EPS15L1Q9UBC2 864 aa25.27■■□□□ 1.64
TROAP-216ENST00000551567 MTRRQ9UBK8 725 aa25.27■■□□□ 1.64
TROAP-216ENST00000551567 VPS37CA5D8V6 355 aaPredicted RBP25.26■■□□□ 1.63
TROAP-216ENST00000551567 TRAPPC3O43617 180 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 NARSO43776 548 aaKnown RBP25.26■■□□□ 1.63
TROAP-216ENST00000551567 TOM1L1O75674 476 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 UBA7P41226 1012 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 DHX8Q14562 1220 aaKnown RBP25.26■■□□□ 1.63
TROAP-216ENST00000551567 ARSHQ5FYA8 562 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 BRAPQ7Z569 592 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 GPBP1Q86WP2 473 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 TMEM105Q8N8V8 129 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 C18orf25Q96B23 403 aaPredicted RBP25.26■■□□□ 1.63
TROAP-216ENST00000551567 CALML4Q96GE6 196 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 DDX27Q96GQ7 796 aaKnown RBP25.26■■□□□ 1.63
TROAP-216ENST00000551567 CNTN3Q9P232 1028 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 FBXL21Q9UKT6 434 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 CDY1Q9Y6F8 540 aa25.26■■□□□ 1.63
TROAP-216ENST00000551567 PODXLO00592 558 aa25.25■■□□□ 1.63
TROAP-216ENST00000551567 CCL16O15467 120 aa25.25■■□□□ 1.63
TROAP-216ENST00000551567 MEFVO15553 781 aaPredicted RBP25.25■■□□□ 1.63
TROAP-216ENST00000551567 HNRNPA1P09651 372 aaKnown RBP eCLIP25.25■■□□□ 1.63
TROAP-216ENST00000551567 KCNE1P15382 129 aa25.25■■□□□ 1.63
TROAP-216ENST00000551567 GRIN1Q05586 938 aa25.25■■□□□ 1.63
TROAP-216ENST00000551567 RSPO2Q6UXX9 243 aaPredicted RBP25.25■■□□□ 1.63
TROAP-216ENST00000551567 GRASPQ7Z6J2 395 aaPredicted RBP25.25■■□□□ 1.63
TROAP-216ENST00000551567 SLC7A14Q8TBB6 771 aa25.25■■□□□ 1.63
TROAP-216ENST00000551567 LRRC15Q8TF66 581 aa25.25■■□□□ 1.63
TROAP-216ENST00000551567 REEP2Q9BRK0 252 aa25.25■■□□□ 1.63
TROAP-216ENST00000551567 KCNG1Q9UIX4 513 aa25.25■■□□□ 1.63
TROAP-216ENST00000551567 POLIQ9UNA4 740 aa25.25■■□□□ 1.63
TROAP-216ENST00000551567 FSHRP23945 695 aa25.24■■□□□ 1.63
TROAP-216ENST00000551567 MATR3P43243 847 aaKnown RBP eCLIP25.24■■□□□ 1.63
TROAP-216ENST00000551567 NTHL1P78549 312 aa25.24■■□□□ 1.63
TROAP-216ENST00000551567 RAB33AQ14088 237 aa25.24■■□□□ 1.63
TROAP-216ENST00000551567 AXDND1Q5T1B0 1012 aaPredicted RBP25.24■■□□□ 1.63
TROAP-216ENST00000551567 ASTLQ6HA08 431 aaPredicted RBP25.24■■□□□ 1.63
TROAP-216ENST00000551567 FLCNQ8NFG4 579 aa25.24■■□□□ 1.63
TROAP-216ENST00000551567 ST13P5Q8NFI4 369 aaPredicted RBP25.24■■□□□ 1.63
TROAP-216ENST00000551567 RASSF8Q8NHQ8 419 aa25.24■■□□□ 1.63
TROAP-216ENST00000551567 BICD1Q96G01 975 aa25.24■■□□□ 1.63
TROAP-216ENST00000551567 FAM86C1Q9NVL1 165 aa25.24■■□□□ 1.63
TROAP-216ENST00000551567 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.24■■□□□ 1.63
TROAP-216ENST00000551567 LARSQ9P2J5 1176 aaKnown RBP25.24■■□□□ 1.63
TROAP-216ENST00000551567 CACNA1HO95180 2353 aa25.24■■□□□ 1.63
TROAP-216ENST00000551567 BMP15O95972 392 aa25.23■■□□□ 1.63
TROAP-216ENST00000551567 LAMP2P13473 410 aa25.23■■□□□ 1.63
TROAP-216ENST00000551567 PLCG1P19174 1290 aa25.23■■□□□ 1.63
TROAP-216ENST00000551567 NCKAP1LP55160 1127 aa25.23■■□□□ 1.63
TROAP-216ENST00000551567 KARSQ15046 597 aaKnown RBP25.23■■□□□ 1.63
TROAP-216ENST00000551567 SF3A1Q15459 793 aaKnown RBP25.23■■□□□ 1.63
TROAP-216ENST00000551567 ZPBP2Q6X784 338 aa25.23■■□□□ 1.63
TROAP-216ENST00000551567 ANKS3Q6ZW76 656 aa25.23■■□□□ 1.63
TROAP-216ENST00000551567 SIX5Q8N196 739 aa25.23■■□□□ 1.63
TROAP-216ENST00000551567 ODF2LQ9ULJ1 636 aa25.23■■□□□ 1.63
TROAP-216ENST00000551567 CLDN3O15551 220 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 SLC26A4O43511 780 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 CFHP08603 1231 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 HOXA9P31269 272 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 CUL4AQ13619 759 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 SLC10A6Q3KNW5 377 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 CWF19L1Q69YN2 538 aaKnown RBP25.22■■□□□ 1.63
TROAP-216ENST00000551567 HAUS6Q7Z4H7 955 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 HAPLN2Q9GZV7 340 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 BLOC1S4Q9NUP1 217 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 NUB1Q9Y5A7 615 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 BACE2Q9Y5Z0 518 aa25.22■■□□□ 1.63
TROAP-216ENST00000551567 H0Y858 1186 aa25.21■■□□□ 1.63
TROAP-216ENST00000551567 H0YCG3 227 aa25.21■■□□□ 1.63
TROAP-216ENST00000551567 GALR2O43603 387 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms