RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 MTFMTQ96DP5 389 aaKnown RBP6.47□□□□□ -1.37
CPSF6-206ENST00000550987 LRFN3Q9BTN0 628 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 PCDH18Q9HCL0 1135 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 SIRT5Q9NXA8 310 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 DNAI1Q9UI46 699 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 CROTQ9UKG9 612 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 TPCN1Q9ULQ1 816 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 SNX13Q9Y5W8 968 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 EYSQ5T1H1 3165 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 PEAK1Q9H792 1746 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 PHRF1Q9P1Y6 1649 aaKnown RBP6.47□□□□□ -1.37
CPSF6-206ENST00000550987 SETXQ7Z333 2677 aaKnown RBP6.46□□□□□ -1.37
CPSF6-206ENST00000550987 DUOX2Q9NRD8 1548 aa6.46□□□□□ -1.37
CPSF6-206ENST00000550987 CCDC189A1A4V9 331 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 RHPN2P1A8MT19 583 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 FSBPO95073 299 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 SMARCA1P28370 1054 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 ADCY8P40145 1251 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 TRAPPC10P48553 1259 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 ANTXR2P58335 489 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 SRSF3P84103 164 aaKnown RBP6.46□□□□□ -1.38
CPSF6-206ENST00000550987 CACNA1BQ00975 2339 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 BTKQ06187 659 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 MGAT2Q10469 447 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 FGL2Q14314 439 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 GJC2Q5T442 439 aaPredicted RBP6.46□□□□□ -1.38
CPSF6-206ENST00000550987 MAEAQ7L5Y9 396 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 SH2D3CQ8N5H7 860 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 PPM1EQ8WY54 764 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 CLPTM1LQ96KA5 538 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 WDR92Q96MX6 357 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 SELENOOQ9BVL4 669 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 POLR3BQ9NW08 1133 aaPredicted RBP6.46□□□□□ -1.38
CPSF6-206ENST00000550987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.46□□□□□ -1.38
CPSF6-206ENST00000550987 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.46□□□□□ -1.38
CPSF6-206ENST00000550987 LRRC37A3O60309 1634 aa6.46□□□□□ -1.38
CPSF6-206ENST00000550987 PIK3C2AO00443 1686 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 LAMA3Q16787 3333 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 SH3BP5O60239 455 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 PHF2O75151 1096 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 ENDOD1O94919 500 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 IL18BPO95998 194 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 C8BP07358 591 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 SYN1P17600 705 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 PFKLP17858 780 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 PAX3P23760 479 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 VIPR1P32241 457 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 THBS2P35442 1172 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 DSC2Q02487 901 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 CD69Q07108 199 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 PPP3CAQ08209 521 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 STILQ15468 1287 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 KANK2Q63ZY3 851 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 TMEM132EQ6IEE7 984 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 XRRA1Q6P2D8 792 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 ZNF605Q86T29 641 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 IRF2BP1Q8IU81 584 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 ANKRD42Q8N9B4 389 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 FLAD1Q8NFF5 587 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 ZSWIM3Q96MP5 696 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 UHRF1Q96T88 793 aaPredicted RBP6.45□□□□□ -1.38
CPSF6-206ENST00000550987 FDXACB1Q9BRP7 624 aaPredicted RBP6.45□□□□□ -1.38
CPSF6-206ENST00000550987 LRRC27Q9C0I9 530 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 MANSC1Q9H8J5 431 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 ARFGAP3Q9NP61 516 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 SCOCQ9UIL1 159 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 WASF3Q9UPY6 502 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 PCDHB1Q9Y5F3 818 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 PCDHA3Q9Y5H8 950 aa6.45□□□□□ -1.38
CPSF6-206ENST00000550987 TTC28Q96AY4 2481 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 A0A088AWK7 358 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 A0A0G2JNJ9 132 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 CYP7B1O75881 506 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 SEC24DO94855 1032 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-206ENST00000550987 CTSSP25774 331 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 ECHS1P30084 290 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 NCKAP1LP55160 1127 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 MEF2AQ02078 507 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-206ENST00000550987 RAPGEF1Q13905 1077 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 POLD3Q15054 466 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-206ENST00000550987 TXNRD1Q16881 649 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 INO80DQ53TQ3 878 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-206ENST00000550987 GADL1Q6ZQY3 521 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 APBB1IPQ7Z5R6 666 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-206ENST00000550987 DPP9Q86TI2 863 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 MYRIPQ8NFW9 859 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 OR2I1PQ8NGU4 316 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.44□□□□□ -1.38
CPSF6-206ENST00000550987 SMARCC2Q8TAQ2 1214 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 WRNIP1Q96S55 665 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 OSBPL6Q9BZF3 934 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 KIAA1586Q9HCI6 787 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 EPB41L4AQ9HCS5 686 aaPredicted RBP6.44□□□□□ -1.38
CPSF6-206ENST00000550987 CNNM1Q9NRU3 951 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 LMBRD1Q9NUN5 540 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 Q9UFV3 132 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 STAP2Q9UGK3 403 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 FBXO10Q9UK96 956 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 CDC42EP3Q9UKI2 254 aa6.44□□□□□ -1.38
CPSF6-206ENST00000550987 PLA2G2DQ9UNK4 145 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms