RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.87□□□□□ -0.35
VDR-208ENST00000550325 OTOAQ7RTW8 1153 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 SYT2Q8N9I0 419 aaPredicted RBP12.87□□□□□ -0.35
VDR-208ENST00000550325 ERMNQ8TAM6 284 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 CERKQ8TCT0 537 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 TRAPPC9Q96Q05 1148 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 APEX2Q9UBZ4 518 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.87□□□□□ -0.35
VDR-208ENST00000550325 ERVV-1B6SEH8 477 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 TPH2Q8IWU9 490 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 ENDOVQ8N8Q3 282 aaKnown RBP12.87□□□□□ -0.35
VDR-208ENST00000550325 HIPK4Q8NE63 616 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 RFWD2Q8NHY2 731 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 KAT5Q92993 513 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 BORCS6Q96GS4 357 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 MKNK1Q9BUB5 465 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 WNT8AQ9H1J5 351 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 CHMP2BQ9UQN3 213 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 ZNF804BA4D1E1 1349 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 ASTN1O14525 1302 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 STRCP1A6NGW2 1772 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 HNRNPRO43390 633 aaKnown RBP12.87□□□□□ -0.35
VDR-208ENST00000550325 USP1O94782 785 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 RRM1P23921 792 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 GCLMP48507 274 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 TNFAIP8L3Q5GJ75 292 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 SNRNP27Q8WVK2 155 aaKnown RBP12.87□□□□□ -0.35
VDR-208ENST00000550325 TUBGCP5Q96RT8 1024 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 ZNF184Q99676 751 aaPredicted RBP12.87□□□□□ -0.35
VDR-208ENST00000550325 TRAF3IP3Q9Y228 551 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 A0A1W2PPM1 405 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 CALCAP01258 141 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 ANXA13P27216 316 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 IL6STP40189 918 aaPredicted RBP12.86□□□□□ -0.35
VDR-208ENST00000550325 MAGEA4P43358 317 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 DPY19L2P1Q6NXN4 242 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 CLNKQ7Z7G1 428 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 ANKMY2Q8IV38 441 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 MAML1Q92585 1016 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 BICD1Q96G01 975 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 CENPKQ9BS16 269 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 PDP2Q9P2J9 529 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.86□□□□□ -0.35
VDR-208ENST00000550325 ADAMTS7Q9UKP4 1686 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 EDF1O60869 148 aaKnown RBP12.86□□□□□ -0.35
VDR-208ENST00000550325 SGPL1O95470 568 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 IFNB1P01574 187 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 TPP2P29144 1249 aaPredicted RBP12.86□□□□□ -0.35
VDR-208ENST00000550325 SERPINB3P29508 390 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 PLCB3Q01970 1234 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 C6orf163Q5TEZ5 329 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 APLFQ8IW19 511 aaPredicted RBP12.86□□□□□ -0.35
VDR-208ENST00000550325 PRR11Q96HE9 360 aaPredicted RBP12.86□□□□□ -0.35
VDR-208ENST00000550325 HIC2Q96JB3 615 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 BTBD10Q9BSF8 475 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 TRAIPQ9BWF2 469 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 SYNCQ9H7C4 482 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 DMAP1Q9NPF5 467 aaPredicted RBP12.86□□□□□ -0.35
VDR-208ENST00000550325 KLHL11Q9NVR0 708 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 WHRNQ9P202 907 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 CICQ96RK0 1608 aaPredicted RBP12.86□□□□□ -0.35
VDR-208ENST00000550325 USP17L10C9JJH3 530 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 CYP26A1O43174 497 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 LYNP07948 512 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 KRT4P19013 534 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 SLC12A3P55017 1021 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 RTP1P59025 263 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 KDSRQ06136 332 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 EPC2Q52LR7 807 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 FAM136AQ96C01 138 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 ANAPC7Q9UJX3 599 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 GRID1Q9ULK0 1009 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 PCDHA3Q9Y5H8 950 aa12.86□□□□□ -0.35
VDR-208ENST00000550325 H3BRJ5 948 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 EDIL3O43854 480 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 ENO1P06733 434 aaKnown RBP12.85□□□□□ -0.35
VDR-208ENST00000550325 AMPD1P23109 780 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 ADRA1DP25100 572 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 ARFIP2P53365 341 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 TMED1Q13445 227 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 STAT4Q14765 748 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 P3H1Q32P28 736 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 C10orf82Q8WW14 230 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 HAUS1Q96CS2 278 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
VDR-208ENST00000550325 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.85□□□□□ -0.35
VDR-208ENST00000550325 A6NJR5 290 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 GSC2O15499 205 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 CIB2O75838 187 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 GGPS1O95749 300 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 GRIK5Q16478 980 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 KBTBD2Q8IY47 623 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 ADGRF4Q8IZF3 695 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 JDP2Q8WYK2 163 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 ZNF75CPQ92670 426 aaPredicted RBP12.85□□□□□ -0.35
VDR-208ENST00000550325 CLPTM1LQ96KA5 538 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 ETNK2Q9NVF9 386 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 LARSQ9P2J5 1176 aaKnown RBP12.85□□□□□ -0.35
VDR-208ENST00000550325 RABGAP1Q9Y3P9 1069 aa12.85□□□□□ -0.35
VDR-208ENST00000550325 ZBTB39O15060 712 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms