RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 KLRC3Q07444 240 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 SART3Q15020 963 aaKnown RBP7.45□□□□□ -1.22
UBE2N-204ENST00000549833 INF2Q27J81 1249 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 CCDC178Q5BJE1 867 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 ZNF648Q5T619 568 aaPredicted RBP7.45□□□□□ -1.22
UBE2N-204ENST00000549833 IFIT1BQ5T764 474 aaKnown RBP7.45□□□□□ -1.22
UBE2N-204ENST00000549833 BLOC1S2Q6QNY1 142 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 Q6ZUG5 572 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 SYDE1Q6ZW31 735 aaPredicted RBP7.45□□□□□ -1.22
UBE2N-204ENST00000549833 DGKHQ86XP1 1220 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 RAB11FIP4Q86YS3 637 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 JMYQ8N9B5 988 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 GMCL1P1Q8NEA9 526 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 BHLHE22Q8NFJ8 381 aaPredicted RBP7.45□□□□□ -1.22
UBE2N-204ENST00000549833 USP33Q8TEY7 942 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 ANKS1AQ92625 1134 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 TTC14Q96N46 770 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 IPO9Q96P70 1041 aaKnown RBP7.45□□□□□ -1.22
UBE2N-204ENST00000549833 C22orf23Q9BZE7 217 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 KAT14Q9H8E8 782 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 LY9Q9HBG7 655 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 RNF186Q9NXI6 227 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.45□□□□□ -1.22
UBE2N-204ENST00000549833 ISY1Q9ULR0 285 aaKnown RBP7.45□□□□□ -1.22
UBE2N-204ENST00000549833 FRMPD2Q68DX3 1309 aaPredicted RBP7.45□□□□□ -1.22
UBE2N-204ENST00000549833 WDR19Q8NEZ3 1342 aa7.45□□□□□ -1.22
UBE2N-204ENST00000549833 ESYT3A0FGR9 886 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 WDR46O15213 610 aaKnown RBP7.44□□□□□ -1.22
UBE2N-204ENST00000549833 DLX3O60479 287 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 PABPC1P11940 636 aaKnown RBP7.44□□□□□ -1.22
UBE2N-204ENST00000549833 HOXA7P31268 230 aaPredicted RBP7.44□□□□□ -1.22
UBE2N-204ENST00000549833 ANAPC15P60006 121 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 YBX1P67809 324 aaKnown RBP7.44□□□□□ -1.22
UBE2N-204ENST00000549833 IRX3P78415 501 aaPredicted RBP7.44□□□□□ -1.22
UBE2N-204ENST00000549833 MAP2K1Q02750 393 aaPredicted RBP7.44□□□□□ -1.22
UBE2N-204ENST00000549833 CRHR2Q13324 411 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 PTPROQ16827 1216 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 CCDC96Q2M329 555 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 RNF187Q5TA31 235 aaPredicted RBP7.44□□□□□ -1.22
UBE2N-204ENST00000549833 OTUD7BQ6GQQ9 843 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 PAQR3Q6TCH7 311 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 NSMFQ6X4W1 530 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 RPTNQ6XPR3 784 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 CATSPERGQ6ZRH7 1159 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 USP53Q70EK8 1073 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 KCTD1Q719H9 257 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 RUFY3Q7L099 469 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 CCDC103Q8IW40 242 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 DCAF4Q8WV16 495 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 LPAR1Q92633 364 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 IL17RAQ96F46 866 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 P2RX7Q99572 595 aaKnown RBP7.44□□□□□ -1.22
UBE2N-204ENST00000549833 CDC6Q99741 560 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 MYL10Q9BUA6 226 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 TM6SF1Q9BZW5 370 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 MCOLN1Q9GZU1 580 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 FBXO28Q9NVF7 368 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 MARCH2Q9P0N8 246 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 TMEFF2Q9UIK5 374 aaPredicted RBP7.44□□□□□ -1.22
UBE2N-204ENST00000549833 SLC45A1Q9Y2W3 748 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 TIMM13Q9Y5L4 95 aaPredicted RBP7.44□□□□□ -1.22
UBE2N-204ENST00000549833 CYP46A1Q9Y6A2 500 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 DOCK5Q9H7D0 1870 aa7.44□□□□□ -1.22
UBE2N-204ENST00000549833 TEX51A0A1B0GUA7 166 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 CCDC69A6NI79 296 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 TMEM232C9JQI7 657 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 CA12O43570 354 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 ADCY3O60266 1144 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 FLOT1O75955 427 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 GOLGA8HP0CJ92 632 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 HSPA1AP0DMV8 641 aaKnown RBP7.43□□□□□ -1.22
UBE2N-204ENST00000549833 HSPA1BP0DMV9 641 aaKnown RBP7.43□□□□□ -1.22
UBE2N-204ENST00000549833 PDHBP11177 359 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 RXRAP19793 462 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 SLC16A2P36021 539 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 LIFRP42702 1097 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 SLC1A4P43007 532 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 HERVK_113P62684 666 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 PABPC4Q13310 644 aaKnown RBP eCLIP7.43□□□□□ -1.225e-7■□□□□ 8.7
UBE2N-204ENST00000549833 TOB2Q14106 344 aaPredicted RBP7.43□□□□□ -1.22
UBE2N-204ENST00000549833 PLEKHN1Q494U1 663 aaPredicted RBP7.43□□□□□ -1.22
UBE2N-204ENST00000549833 WWC2Q6AWC2 1192 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 CATIPQ7Z7H3 387 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 NETO2Q8NC67 525 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 NUP133Q8WUM0 1156 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 PARK7Q99497 189 aaKnown RBP7.43□□□□□ -1.22
UBE2N-204ENST00000549833 MTA3Q9BTC8 594 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 CPVLQ9H3G5 476 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 UPF2Q9HAU5 1272 aaKnown RBP7.43□□□□□ -1.22
UBE2N-204ENST00000549833 ZCCHC17Q9NP64 241 aaKnown RBP7.43□□□□□ -1.22
UBE2N-204ENST00000549833 PDRG1Q9NUG6 133 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 KLHL14Q9P2G3 628 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 CPA4Q9UI42 421 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 DBR1Q9UK59 544 aaKnown RBP7.43□□□□□ -1.22
UBE2N-204ENST00000549833 NUDT5Q9UKK9 219 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 NAP1L2Q9ULW6 460 aaPredicted RBP7.43□□□□□ -1.22
UBE2N-204ENST00000549833 SYNPO2Q9UMS6 1093 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 ADGRA2Q96PE1 1338 aa7.43□□□□□ -1.22
UBE2N-204ENST00000549833 TCHHQ07283 1943 aa7.42□□□□□ -1.22
UBE2N-204ENST00000549833 KLF18A0A0U1RQI7 1052 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms