RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 NEUROG3Q9Y4Z2 214 aa9.41□□□□□ -0.9
TROAP-208ENST00000548817 LAMA1P25391 3075 aa9.41□□□□□ -0.9
TROAP-208ENST00000548817 DOCK6Q96HP0 2047 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 INO80B-WBP1J3KQ70 363 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 M0R2N6 131 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 AKAP3O75969 853 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 CSRP1P21291 193 aaKnown RBP9.4□□□□□ -0.9
TROAP-208ENST00000548817 HOXA11P31270 313 aaPredicted RBP9.4□□□□□ -0.9
TROAP-208ENST00000548817 MLLT6P55198 1093 aaPredicted RBP9.4□□□□□ -0.9
TROAP-208ENST00000548817 SATB1Q01826 763 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 LRRC32Q14392 662 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 DAB2IPQ5VWQ8 1189 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 RNF43Q68DV7 783 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 PIK3AP1Q6ZUJ8 805 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 ELSPBP1Q96BH3 223 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 DYDC2Q96IM9 177 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 AIFM3Q96NN9 605 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 SCNM1Q9BWG6 230 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 APOL6Q9BWW8 343 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 ARRDC1-AS1Q9H2J1 176 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 MINDY3Q9H8M7 445 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 LMAN1LQ9HAT1 526 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 KCNMB3Q9NPA1 279 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 VPS45Q9NRW7 570 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 VAV3Q9UKW4 847 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 IPPQ9Y573 584 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 ADAMTS20P59510 1910 aa9.4□□□□□ -0.9
TROAP-208ENST00000548817 COL4A2P08572 1712 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 FREM2Q5SZK8 3169 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 CCDC163A0A0D9SF12 145 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 ARL5CA6NH57 179 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 K7ESF4 209 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 MYBP10242 640 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 CEACAM1P13688 526 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 RAP1GAPP47736 663 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 PTENP60484 403 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 CYP4A11Q02928 519 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 SRSF5Q13243 272 aaKnown RBP9.39□□□□□ -0.91
TROAP-208ENST00000548817 CTTNQ14247 550 aaKnown RBP9.39□□□□□ -0.91
TROAP-208ENST00000548817 TMEM132AQ24JP5 1023 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 USP41Q3LFD5 358 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 PPM1LQ5SGD2 360 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 UBXN11Q5T124 520 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 TAS1R1Q7RTX1 841 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 CACNA2D4Q7Z3S7 1137 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 WDR5BQ86VZ2 330 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
TROAP-208ENST00000548817 ITFG1Q8TB96 612 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 FAM3CQ92520 227 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 IRF7Q92985 503 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 GAD1Q99259 594 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 CSRNP2Q9H175 543 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 BRD9Q9H8M2 597 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 RGL1Q9NZL6 768 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 PARP2Q9UGN5 583 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 GIT1Q9Y2X7 761 aa9.39□□□□□ -0.91
TROAP-208ENST00000548817 TDRD15B5MCY1 1934 aaKnown RBP9.39□□□□□ -0.91
TROAP-208ENST00000548817 UNC79Q9P2D8 2635 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 STK36Q9NRP7 1315 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 SDK1Q7Z5N4 2213 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 TSPAN1O60635 241 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 TADA2AO75478 443 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 DGAT1O75907 488 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 C8AP07357 584 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 CHRNB1P11230 501 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 KRT2P35908 639 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 MLH1P40692 756 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 SCNN1GP51170 649 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
TROAP-208ENST00000548817 NTHL1P78549 312 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 POU5F1BQ06416 359 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 DSC1Q08554 894 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 PTGDRQ13258 359 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 ANKRD1Q15327 319 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 NPY5RQ15761 445 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 CALCRLQ16602 461 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 UVSSAQ2YD98 709 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 PDZD3Q86UT5 571 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 POTEDQ86YR6 584 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 COLGALT2Q8IYK4 626 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 SMG8Q8ND04 991 aaKnown RBP9.38□□□□□ -0.91
TROAP-208ENST00000548817 GAB3Q8WWW8 586 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 CPB2Q96IY4 423 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 EIF2AQ9BY44 585 aaKnown RBP9.38□□□□□ -0.91
TROAP-208ENST00000548817 AVENQ9NQS1 362 aaPredicted RBP9.38□□□□□ -0.91
TROAP-208ENST00000548817 ANKEF1Q9NU02 776 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 ORC3Q9UBD5 711 aaPredicted RBP9.38□□□□□ -0.91
TROAP-208ENST00000548817 PCDHA12Q9UN75 941 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
TROAP-208ENST00000548817 ZBTB39O15060 712 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 AXIN1O15169 862 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 PFKFB2O60825 505 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 SLITRK3O94933 977 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 SPINK2P20155 84 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 MPLP40238 635 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 TRIM29Q14134 588 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 GAS6Q14393 721 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 PABPC1LQ4VXU2 614 aaKnown RBP9.37□□□□□ -0.91
TROAP-208ENST00000548817 ERICH6BQ5W0A0 696 aa9.37□□□□□ -0.91
TROAP-208ENST00000548817 FUT10Q6P4F1 479 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms