RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 SFXN1Q9H9B4 322 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 XPO5Q9HAV4 1204 aaKnown RBP eCLIP0.45□□□□□ -2.34
CEP290-203ENST00000547691 WDR6Q9NNW5 1121 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 KCNH3Q9ULD8 1083 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 TMX2Q9Y320 296 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 R4GN57 208 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ZANQ9Y493 2812 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CLUHO75153 1309 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 FRMPD2Q68DX3 1309 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 NUP205Q92621 2012 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 BCLAF3A2AJT9 711 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 KRTAP4-16G5E9R7 235 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 VWA5AO00534 786 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 TRIM66O15016 1216 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 MMP3P08254 477 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 FCER1AP12319 257 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CD59P13987 128 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ERCC3P19447 782 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 GPTP24298 496 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 HIBADHP31937 336 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 PREPP48147 710 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CPT1AP50416 773 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 HMGCS2P54868 508 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 UCNP55089 124 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 EIF4G2P78344 907 aaKnown RBP eCLIP0.45□□□□□ -2.34
CEP290-203ENST00000547691 PDE4BQ07343 736 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 IKBKEQ14164 716 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 KARSQ15046 597 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 PRKD1Q15139 912 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 MLF2Q15773 248 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 FSCN1Q16658 493 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 KIAA1755Q5JYT7 1200 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 OTUD3Q5T2D3 398 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 CEP135Q66GS9 1140 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 RCSD1Q6JBY9 416 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 KSR2Q6VAB6 950 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 LIN28BQ6ZN17 250 aaKnown RBP eCLIP0.45□□□□□ -2.34
CEP290-203ENST00000547691 AGMOQ6ZNB7 445 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ZNF765Q7L2R6 523 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 OTOP3Q7RTS5 596 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 TRIM50Q86XT4 487 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 FMNL3Q8IVF7 1028 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SLC44A3Q8N4M1 653 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SMCR8Q8TEV9 937 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 ELSPBP1Q96BH3 223 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ZNF707Q96C28 371 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 SLITRK1Q96PX8 696 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SCNM1Q9BWG6 230 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 STK31Q9BXU1 1019 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 DPH1Q9BZG8 443 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CAPN10Q9HC96 672 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CD248Q9HCU0 757 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ZDHHC7Q9NXF8 308 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 OBP2AQ9NY56 170 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CRIM1Q9NZV1 1036 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SERTAD1Q9UHV2 236 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 DBR1Q9UK59 544 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 PPP1R9AQ9ULJ8 1098 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SIT1Q9Y3P8 196 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 PCDHGA1Q9Y5H4 931 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 MRPL42Q9Y6G3 142 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 TNRC6AQ8NDV7 1962 aaKnown RBP0.44□□□□□ -2.34
CEP290-203ENST00000547691 DOCK8Q8NF50 2099 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 TMEM131Q92545 1883 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 CCDC194A0A1B0GVG4 234 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 C11orf97A0A1B0GVM6 126 aaPredicted RBP0.44□□□□□ -2.34
CEP290-203ENST00000547691 ESYT2A0FGR8 921 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 ASB14A6NK59 587 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 H3BQ06 376 aaPredicted RBP0.44□□□□□ -2.34
CEP290-203ENST00000547691 NCAM2O15394 837 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 CHRNB1P11230 501 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 ITGA3P26006 1051 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 SHMT1P34896 483 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 GTF2F1P35269 517 aaKnown RBP eCLIP0.44□□□□□ -2.34
CEP290-203ENST00000547691 ADRA1BP35368 520 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 PTGER4P35408 488 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 SCNN1AP37088 669 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 IGHMBP2P38935 993 aaKnown RBP0.44□□□□□ -2.34
CEP290-203ENST00000547691 DCTP40126 519 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 STAT3P40763 770 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 ABCG1P45844 678 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 RGS3P49796 1198 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 EPHA5P54756 1037 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 KRT83P78385 493 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 ATP8B2P98198 1209 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 SCAPQ12770 1279 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 FOXE3Q13461 319 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 COG2Q14746 738 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 OCLNQ16625 522 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 CCDC27Q2M243 656 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 CCDC144BQ3MJ40 725 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 CCDC184Q52MB2 194 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 AXDND1Q5T1B0 1012 aaPredicted RBP0.44□□□□□ -2.34
CEP290-203ENST00000547691 TTC39BQ5VTQ0 682 aaPredicted RBP0.44□□□□□ -2.34
CEP290-203ENST00000547691 IER5Q5VY09 327 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 SEZ6L2Q6UXD5 910 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 BTNL9Q6UXG8 535 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 TOGARAM2Q6ZUX3 1019 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 OTOP2Q7RTS6 562 aa0.44□□□□□ -2.34
CEP290-203ENST00000547691 CACNA2D4Q7Z3S7 1137 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms