RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 A0A0U1RQG5 324 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-222ENST00000544585 SSU72P8A0A1W2PR75 194 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 PTPDC1A2A3K4 754 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 CCDC66A2RUB6 948 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 C9orf172C9J069 976 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 WDR46O15213 610 aaKnown RBP7.17□□□□□ -1.26
CPSF7-222ENST00000544585 SOD2P04179 222 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 GSTM1P09488 218 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 SPATA31C1P0DKV0 1188 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 LCP1P13796 627 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 VAV1P15498 845 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 CSF2RAP15509 400 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 ATP2A2P16615 1042 aaKnown RBP7.17□□□□□ -1.26
CPSF7-222ENST00000544585 TAL1P17542 331 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-222ENST00000544585 CST5P28325 142 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-222ENST00000544585 GMPRP36959 345 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 SESN3P58005 492 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 ATP8B2P98198 1209 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 TNK2Q07912 1038 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 ADGRE1Q14246 886 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 TMEM132BQ14DG7 1078 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 ZNF385CQ66K41 422 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-222ENST00000544585 MAMDC4Q6UXC1 1216 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 RCBTB1Q8NDN9 531 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 WFDC12Q8WWY7 111 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 DDX11Q96FC9 970 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 FUBP3Q96I24 572 aaKnown RBP eCLIP7.17□□□□□ -1.26
CPSF7-222ENST00000544585 SCYL1Q96KG9 808 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 NACC1Q96RE7 527 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 LRFN3Q9BTN0 628 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 SLC12A9Q9BXP2 914 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 CRNKL1Q9BZJ0 848 aaKnown RBP7.17□□□□□ -1.26
CPSF7-222ENST00000544585 TRIT1Q9H3H1 467 aaKnown RBP7.17□□□□□ -1.26
CPSF7-222ENST00000544585 ABHD16BQ9H3Z7 469 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 VCPKMTQ9H867 229 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 IL23AQ9NPF7 189 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 PIH1D3Q9NQM4 214 aaKnown RBP7.17□□□□□ -1.26
CPSF7-222ENST00000544585 GPATCH2Q9NW75 528 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 MCM9Q9NXL9 1143 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 COG5Q9UP83 839 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 PCDHA2Q9Y5H9 948 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 ATAD5Q96QE3 1844 aa7.17□□□□□ -1.26
CPSF7-222ENST00000544585 PNMA6EA0A0J9YXQ4 647 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 FAM47E-STBD1D6RA91 191 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 RBAK-RBAKDNI3L0D1 243 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 ARNTLO00327 626 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 VWA5AO00534 786 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 ERC2O15083 957 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 SURF6O75683 361 aaKnown RBP7.16□□□□□ -1.26
CPSF7-222ENST00000544585 CABYRO75952 493 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 PGK2P07205 417 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 ASGR1P07306 291 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 NOS3P29474 1203 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 GJA9P57773 515 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 KLF1Q13351 362 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-222ENST00000544585 ACVR2BQ13705 512 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 ARHGAP44Q17R89 818 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 TMEM31Q5JXX7 168 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 C22orf34Q6ZV56 151 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 OVCH1Q7RTY7 1134 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 SIAH1Q8IUQ4 282 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 FAM20CQ8IXL6 584 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 MFSD4AQ8N468 514 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 CHAMP1Q96JM3 812 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 MPHOSPH6Q99547 160 aaKnown RBP7.16□□□□□ -1.26
CPSF7-222ENST00000544585 GPR62Q9BZJ7 368 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 SLC13A1Q9BZW2 595 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 IPPKQ9H8X2 491 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 SLC4A7Q9Y6M7 1214 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 VCANP13611 3396 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 PRUNE2Q8WUY3 3088 aa7.16□□□□□ -1.26
CPSF7-222ENST00000544585 MAST2Q6P0Q8 1798 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 DNAH12Q6ZR08 3092 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 PRR33A8MZF0 331 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 WNT9AO14904 365 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 PRPF3O43395 683 aaKnown RBP7.15□□□□□ -1.26
CPSF7-222ENST00000544585 SNAI1O95863 264 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-222ENST00000544585 MT-CO1P00395 513 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 CFBP00751 764 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 CD4P01730 458 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 GRK2P25098 689 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 GRK3P35626 688 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 MECP2P51608 486 aaKnown RBP7.15□□□□□ -1.26
CPSF7-222ENST00000544585 RARSP54136 660 aaKnown RBP7.15□□□□□ -1.26
CPSF7-222ENST00000544585 PCBP3P57721 371 aaKnown RBP7.15□□□□□ -1.26
CPSF7-222ENST00000544585 ERVK-21P61565 698 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 NKX3-2P78367 333 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 CRY1Q16526 586 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 KIAA1755Q5JYT7 1200 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 SYCP2LQ5T4T6 812 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 FAM126BQ8IXS8 530 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 AMOTL1Q8IY63 956 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 SPICE1Q8N0Z3 855 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 CBARPQ8N350 705 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-222ENST00000544585 CISD2Q8N5K1 135 aaKnown RBP7.15□□□□□ -1.26
CPSF7-222ENST00000544585 SSH3Q8TE77 659 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 SLC5A5Q92911 643 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 RIOK1Q9BRS2 568 aaKnown RBP7.15□□□□□ -1.26
CPSF7-222ENST00000544585 EPHX3Q9H6B9 360 aa7.15□□□□□ -1.26
CPSF7-222ENST00000544585 VTA1Q9NP79 307 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms