RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 AGTP01019 485 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 BTBD8Q5XKL5 378 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 SNRNP48Q6IEG0 339 aaKnown RBP16.25■□□□□ 0.19
CHD4-210ENST00000544040 C16orf89Q6UX73 402 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 TMEM179Q6ZVK1 233 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 HORMAD1Q86X24 394 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 GPD1LQ8N335 351 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 GFM2Q969S9 779 aaKnown RBP16.25■□□□□ 0.19
CHD4-210ENST00000544040 BBS2Q9BXC9 721 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 CXorf56Q9H5V9 222 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 CYTH3O43739 400 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 KIF12Q96FN5 646 aa16.25■□□□□ 0.19
CHD4-210ENST00000544040 M0R3G1 203 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 CAND2O75155 1236 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 ASMTLO95671 621 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 IREB2P48200 963 aaKnown RBP16.24■□□□□ 0.19
CHD4-210ENST00000544040 USP10Q14694 798 aaKnown RBP16.24■□□□□ 0.19
CHD4-210ENST00000544040 PRPF39Q86UA1 669 aaKnown RBP16.24■□□□□ 0.19
CHD4-210ENST00000544040 PRPF18Q99633 342 aaKnown RBP16.24■□□□□ 0.19
CHD4-210ENST00000544040 TMEM245Q9H330 911 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 PLEKHA5Q9HAU0 1116 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 PVALEFA0A1B0GWK0 134 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 KRT87PA6NCN2 255 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 TDP2O95551 362 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 CLK1P49759 484 aaKnown RBP16.24■□□□□ 0.19
CHD4-210ENST00000544040 TPI1P60174 286 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 DNAL1Q4LDG9 190 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 SYTL3Q4VX76 610 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 ATL2Q8NHH9 583 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 CDYLQ9Y232 598 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 LINC00854A0A1B0GVQ3 168 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 SUPT3HB4E1H0 165 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 KIF28PB7ZC32 967 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 TCF3P15923 654 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 DCUN1D1Q96GG9 259 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 DLGAP3O95886 979 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 RUNX1T1Q06455 604 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 SGO1Q5FBB7 561 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 CCDC103Q8IW40 242 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 URGCPQ8TCY9 931 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 RGS7P49802 495 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 PCSK7Q16549 785 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 RIN3Q8TB24 985 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 DTNBP1Q96EV8 351 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 RBM15Q96T37 977 aaKnown RBP eCLIP16.24■□□□□ 0.194e-7■■■■□ 23.8
CHD4-210ENST00000544040 CHP1Q99653 195 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 STMN3Q9NZ72 180 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 H2AFY2Q9P0M6 372 aaPredicted RBP16.24■□□□□ 0.19
CHD4-210ENST00000544040 DLGAP2Q9P1A6 1054 aa16.24■□□□□ 0.19
CHD4-210ENST00000544040 BBOX1O75936 387 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 AGGF1Q8N302 714 aaeCLIP16.23■□□□□ 0.194e-7■■■□□ 14.7
CHD4-210ENST00000544040 CCDC134Q9H6E4 229 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 LY9Q9HBG7 655 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 RTN2O75298 545 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 CPB1P15086 417 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 KCTD17Q8N5Z5 321 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 EIF2AK1Q9BQI3 630 aaKnown RBP16.23■□□□□ 0.19
CHD4-210ENST00000544040 OSBPL10Q9BXB5 764 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 MRPL4Q9BYD3 311 aaKnown RBP16.23■□□□□ 0.19
CHD4-210ENST00000544040 ABT1Q9ULW3 272 aaKnown RBP16.23■□□□□ 0.19
CHD4-210ENST00000544040 B2RBV5 119 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 ZC3H7BQ9UGR2 993 aaKnown RBP16.23■□□□□ 0.19
CHD4-210ENST00000544040 SNX12Q9UMY4 172 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 GUCA1CO95843 209 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 MYL2P10916 166 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHD4-210ENST00000544040 SLC10A4Q96EP9 437 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 PLEKHA8Q96JA3 519 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 FARP1Q9Y4F1 1045 aaPredicted RBP16.23■□□□□ 0.19
CHD4-210ENST00000544040 PHF2O75151 1096 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 HMBSP08397 361 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 SERPINB1P30740 379 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 GRIK1P39086 918 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 SHC4Q6S5L8 630 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 DGKHQ86XP1 1220 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 SNX31Q8N9S9 440 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 FAM167AQ96KS9 214 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 TMEM117Q9H0C3 514 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 ARHGEF38Q9NXL2 777 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 CHMP2BQ9UQN3 213 aa16.23■□□□□ 0.19
CHD4-210ENST00000544040 MTHFD1LQ6UB35 978 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 TRPM8Q7Z2W7 1104 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 BRD8Q9H0E9 1235 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 RAB6BQ9NRW1 208 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 NEU2Q9Y3R4 380 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 NUP153P49790 1475 aaKnown RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 LOC100653049A0A140TA62 436 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 KRT34O76011 436 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 NMT1P30419 496 aaKnown RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 PLA2G4AP47712 749 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 IRX1P78414 480 aaPredicted RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 PTK7Q13308 1070 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 BYSLQ13895 437 aaKnown RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 DAB2IPQ5VWQ8 1189 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 ASZ1Q8WWH4 475 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 CD274Q9NZQ7 290 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 SNAP23O00161 211 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 CDH2P19022 906 aaPredicted RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 SOAT1P35610 550 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms