RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 DDX27Q96GQ7 796 aaKnown RBP11.89□□□□□ -0.51
SCG3-202ENST00000542355 KREMEN1Q96MU8 473 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 MTG1Q9BT17 334 aaPredicted RBP11.89□□□□□ -0.51
SCG3-202ENST00000542355 PDZD7Q9H5P4 517 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 XPNPEP3Q9NQH7 507 aa11.89□□□□□ -0.51
SCG3-202ENST00000542355 RBAK-RBAKDNI3L0D1 243 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 PHACTR2O75167 634 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 HLA-DRAP01903 254 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 CCDC172P0C7W6 258 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 PIK3CAP42336 1068 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 MFAP3P55082 362 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 WDR44Q5JSH3 913 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 ZNF662Q6ZS27 426 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 RAET1EQ8TD07 263 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 GLMNQ92990 594 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 UPF3AQ9H1J1 476 aaKnown RBP11.88□□□□□ -0.51
SCG3-202ENST00000542355 A0A1B0GUA9 196 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 POM121CA8CG34 1229 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 ADAMTS4O75173 837 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 VNN1O95497 513 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 STAG3L1P0CL83 205 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 NBPF20Q3BBV1 942 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 SCARA3Q6AZY7 606 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 WDR49Q8IV35 697 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 FMNL3Q8IVF7 1028 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 VTI1AQ96AJ9 217 aa11.88□□□□□ -0.51
SCG3-202ENST00000542355 RPF1Q9H9Y2 349 aaKnown RBP11.88□□□□□ -0.51
SCG3-202ENST00000542355 MACROD2A1Z1Q3 448 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 ZC3H11AO75152 810 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCG3-202ENST00000542355 URI1O94763 535 aaPredicted RBP11.87□□□□□ -0.51
SCG3-202ENST00000542355 CLSTN1O94985 981 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 CST3P01034 146 aaPredicted RBP11.87□□□□□ -0.51
SCG3-202ENST00000542355 CXCL8P10145 99 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 MCF2P10911 925 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 TFAMQ00059 246 aaKnown RBP11.87□□□□□ -0.51
SCG3-202ENST00000542355 NCBP1Q09161 790 aaKnown RBP11.87□□□□□ -0.51
SCG3-202ENST00000542355 SURF1Q15526 300 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 KCNA10Q16322 511 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 DUOXA2Q1HG44 320 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 FAM47CQ5HY64 1035 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 SPOPLQ6IQ16 392 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 CATSPER4Q7RTX7 472 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 VPS36Q86VN1 386 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 SLC35F6Q8N357 371 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 SREK1Q8WXA9 508 aaKnown RBP11.87□□□□□ -0.51
SCG3-202ENST00000542355 TSGA10Q9BZW7 698 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 MTMR12Q9C0I1 747 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 SIP14410 1827 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 EVPLQ92817 2033 aa11.87□□□□□ -0.51
SCG3-202ENST00000542355 HMGCRP04035 888 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 ASGR1P07306 291 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 DARSP14868 501 aaKnown RBP11.86□□□□□ -0.51
SCG3-202ENST00000542355 EIF4BP23588 611 aaKnown RBP11.86□□□□□ -0.51
SCG3-202ENST00000542355 HOXC8P31273 242 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 AP3M2P53677 418 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 NCOA4Q13772 614 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 ALKBH5Q6P6C2 394 aaKnown RBP11.86□□□□□ -0.51
SCG3-202ENST00000542355 TRAPPC11Q7Z392 1133 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 DNAAF5Q86Y56 855 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 GLYCTKQ8IVS8 523 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 FBXO22Q8NEZ5 403 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 ADPGKQ9BRR6 497 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 LUC7LQ9NQ29 371 aaKnown RBP11.86□□□□□ -0.51
SCG3-202ENST00000542355 C1orf112Q9NSG2 853 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 MYO1AQ9UBC5 1043 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 NAGPAQ9UK23 515 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 MGAMO43451 1857 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 DDX3XO00571 662 aaKnown RBP eCLIP11.86□□□□□ -0.514e-7■□□□□ 8.8
SCG3-202ENST00000542355 CYP26A1O43174 497 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 B4GALT4O60513 344 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 CLTAP09496 248 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 HOXA11P31270 313 aaPredicted RBP11.86□□□□□ -0.51
SCG3-202ENST00000542355 NKX3-2P78367 333 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 BMS1Q14692 1282 aaKnown RBP11.86□□□□□ -0.51
SCG3-202ENST00000542355 EFCAB13Q8IY85 973 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 NME8Q8N427 588 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 TMEM40Q8WWA1 233 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 SHC3Q92529 594 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 DHX38Q92620 1227 aaKnown RBP11.86□□□□□ -0.51
SCG3-202ENST00000542355 PACSIN1Q9BY11 444 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 CRISPLD2Q9H0B8 497 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 APOBEC3GQ9HC16 384 aaKnown RBP11.86□□□□□ -0.51
SCG3-202ENST00000542355 GTF2IRD1Q9UHL9 959 aa11.86□□□□□ -0.51
SCG3-202ENST00000542355 LACTBL1A8MY62 500 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 ABCB7O75027 752 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 SGPL1O95470 568 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 TMEM191BP0C7N4 346 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 TNFAIP3P21580 790 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 GCNT1Q02742 428 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 NAB2Q15742 525 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 GDF6Q6KF10 455 aaPredicted RBP11.85□□□□□ -0.51
SCG3-202ENST00000542355 ENOSF1Q7L5Y1 443 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 FAM71AQ8IYT1 594 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 TXLNBQ8N3L3 684 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 KLHDC9Q8NEP7 349 aa11.85□□□□□ -0.51
SCG3-202ENST00000542355 LNX1Q8TBB1 728 aaPredicted RBP11.85□□□□□ -0.51
SCG3-202ENST00000542355 U2AF1L4Q8WU68 220 aaKnown RBP11.85□□□□□ -0.51
SCG3-202ENST00000542355 ZNF296Q8WUU4 475 aaPredicted RBP11.85□□□□□ -0.51
SCG3-202ENST00000542355 SECISBP2LQ93073 1101 aaKnown RBP11.85□□□□□ -0.51
SCG3-202ENST00000542355 ACP6Q9NPH0 428 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms