RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 USP4Q13107 963 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 TBX2Q13207 712 aaPredicted RBP8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 MTFR1Q15390 333 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 KCNA10Q16322 511 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 MAN2A1Q16706 1144 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 EEF1DP3Q658K8 133 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 E4F1Q66K89 784 aaPredicted RBP8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 FAM114A1Q8IWE2 563 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 ZC3H3Q8IXZ2 948 aaKnown RBP8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 TMEM192Q8IY95 271 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 KIAA0319LQ8IZA0 1049 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 ZSCAN1Q8NBB4 408 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 IPO4Q8TEX9 1081 aaKnown RBP8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 TMEM40Q8WWA1 233 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 ATRIPQ8WXE1 791 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 SLC35C1Q96A29 364 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 CTAGE1Q96RT6 745 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 OSMRQ99650 979 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 ARID3AQ99856 593 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 CGNQ9P2M7 1197 aaKnown RBP8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 PTPRJQ12913 1337 aa8.4□□□□□ -1.06
AC005840.3-201ENST00000541888 SOWAHDA6NJG2 315 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 MSCO60682 206 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 ADAMTS4O75173 837 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 DUSP11O75319 330 aaKnown RBP8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 PRKCBP05771 671 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 CYP2C9P11712 490 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 HOXD8P13378 290 aaPredicted RBP8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 TRIM21P19474 475 aaKnown RBP8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 GCLMP48507 274 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 SLC26A2P50443 739 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 PPP3CAQ08209 521 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 STRN3Q13033 797 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 SNRNP35Q16560 246 aaKnown RBP8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 C1orf220Q5T0J3 134 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 IER5Q5VY09 327 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 GDF6Q6KF10 455 aaPredicted RBP8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 STXBP4Q6ZWJ1 553 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 VWA5B2Q8N398 1253 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 VTI1AQ96AJ9 217 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 BORCS6Q96GS4 357 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 CEP63Q96MT8 703 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 NTPCRQ9BSD7 190 aaKnown RBP8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 DESI2Q9BSY9 194 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 TIPINQ9BVW5 301 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 LSM14BQ9BX40 385 aaKnown RBP8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 CXCL16Q9H2A7 254 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 DMAC2Q9NW81 257 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 TRMT1Q9NXH9 659 aaKnown RBP8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 TFR2Q9UP52 801 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 SIK3Q9Y2K2 1263 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 FRMD4BQ9Y2L6 1034 aa8.4□□□□□ -1.07
AC005840.3-201ENST00000541888 HMGCRP04035 888 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 PLEKP08567 350 aaPredicted RBP8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 SKILP12757 684 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 SFPQP23246 707 aaKnown RBP eCLIP8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 RPL13P26373 211 aaKnown RBP8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 SOX11P35716 441 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 PSMC2P35998 433 aaKnown RBP8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 DNM2P50570 870 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 MAP2K1Q02750 393 aaPredicted RBP8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 ARID5AQ03989 594 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 MBTD1Q05BQ5 628 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 POU4F2Q12837 409 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 ZNF484Q5JVG2 852 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 TMEM139Q8IV31 216 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 THNSL1Q8IYQ7 743 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 LINC01465Q8N7H1 131 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 C7orf31Q8N865 590 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 RETREG2Q8NC44 543 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 KIAA1524Q8TCG1 905 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 TCHPQ9BT92 498 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 CCDC113Q9H0I3 377 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 TMEM206Q9H813 350 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 PDE11AQ9HCR9 933 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 GRIN2DO15399 1336 aa8.39□□□□□ -1.07
AC005840.3-201ENST00000541888 CDH23Q9H251 3354 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 MFAP3LO75121 409 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 NOL4O94818 638 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 FGFR1OPO95684 399 aaKnown RBP8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 CALCAP01258 141 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 IL2RAP01589 272 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 HSPA6P17066 643 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 GRK4P32298 578 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 GJA9P57773 515 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 RTP1P59025 263 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 BFSP1Q12934 665 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 FKBP15Q5T1M5 1219 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 CRELD2Q6UXH1 353 aaPredicted RBP8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 ZNF771Q7L3S4 317 aaPredicted RBP8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 PPFIBP1Q86W92 1011 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 DNAAF5Q86Y56 855 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 XXYLT1Q8NBI6 393 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 CHP1Q99653 195 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 PI4K2AQ9BTU6 479 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 MSTO1Q9BUK6 570 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 TSPYL1Q9H0U9 437 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 TMX1Q9H3N1 280 aa8.38□□□□□ -1.07
AC005840.3-201ENST00000541888 ST6GALNAC4Q9H4F1 302 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms