RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PGAP2Q9UHJ9 254 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 NENFQ9UMX5 172 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 AKT3Q9Y243 479 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 NCANO14594 1321 aa5.57□□□□□ -1.52
PROM1-220ENST00000540805 COL2A1P02458 1487 aaPredicted RBP5.57□□□□□ -1.52
PROM1-220ENST00000540805 RBM47A0AV96 593 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 LRRD1A4D1F6 860 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 DDX3XO00571 662 aaKnown RBP eCLIP5.56□□□□□ -1.52
PROM1-220ENST00000540805 SLC37A4O43826 429 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 DKC1O60832 514 aaKnown RBP eCLIP5.56□□□□□ -1.52
PROM1-220ENST00000540805 ZNF189O75820 626 aaPredicted RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 GJB6O95452 261 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 BMP3P12645 472 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 FERP16591 822 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 NR2F2P24468 414 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ATP5DP30049 168 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 IREB2P48200 963 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 POLGP54098 1239 aaPredicted RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 GALCP54803 685 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ADCY1Q08828 1119 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 AUHQ13825 339 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 SKIV2LQ15477 1246 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 EDRF1Q3B7T1 1238 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 KIAA1841Q6NSI8 718 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 TMEM154Q6P9G4 183 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 RTKN2Q8IZC4 609 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 RBM46Q8TBY0 533 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 CEP95Q96GE4 821 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 RUNDC3BQ96NL0 473 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 PIGSQ96S52 555 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 FGFBP2Q9BYJ0 223 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 SEMA4AQ9H3S1 761 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ERVK-5Q9HDB9 667 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 METTL5Q9NRN9 209 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 TMEM260Q9NX78 707 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 KLHL14Q9P2G3 628 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ARMCX3Q9UH62 379 aaPredicted RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 POLIQ9UNA4 740 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 STK25O00506 426 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 NDC80O14777 642 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 RIPK2O43353 540 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 PHF2O75151 1096 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 TDP2O95551 362 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 SKIV2L2P42285 1042 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 BPIFB4P59827 614 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 DCAF12L1Q5VU92 463 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 STYK1Q6J9G0 422 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ASRGL1Q7L266 308 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 CLEC10AQ8IUN9 316 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 MFN1Q8IWA4 741 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 TRIM42Q8IWZ5 723 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 FAM178BQ8IXR5 827 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ZC3H3Q8IXZ2 948 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 ANKRD42Q8N9B4 389 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 CCDC17Q96LX7 622 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 MRIQ9BWK5 157 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ROPN1BQ9BZX4 212 aaPredicted RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 KCTD10Q9H3F6 313 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ROPN1Q9HAT0 212 aaPredicted RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 OSGEPQ9NPF4 335 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 EMILIN3Q9NT22 766 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 TXLNGQ9NUQ3 528 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 GRHL1Q9NZI5 618 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 DBR1Q9UK59 544 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 KDM3AQ9Y4C1 1321 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 A0A1W2PRG0 241 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 TMEM120BA0PK00 339 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 MAGEB3O15480 346 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 GFPT2O94808 682 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 XRCC5P13010 732 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 HSPA6P17066 643 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 GM2AP17900 193 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 PON1P27169 355 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 CHRNA3P32297 505 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 PCK1P35558 622 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 LIG4P49917 911 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 FKBP1AP62942 108 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 MRPS35P82673 323 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 MPP3Q13368 585 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ZNF211Q13398 564 aaPredicted RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 PDCD2Q16342 344 aaPredicted RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 SLC15A2Q16348 729 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 MFSD5Q6N075 450 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 C4orf50Q6ZRC1 276 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 INTS8Q75QN2 995 aaKnown RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 FRMD5Q7Z6J6 570 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 EXOC3L1Q86VI1 746 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 APLFQ8IW19 511 aaPredicted RBP5.56□□□□□ -1.52
PROM1-220ENST00000540805 SLC35G2Q8TBE7 412 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ZDHHC15Q96MV8 337 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 PHF12Q96QT6 1004 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ADPGKQ9BRR6 497 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 ZBED2Q9BTP6 218 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 NT5C3AQ9H0P0 336 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 GLT8D2Q9H1C3 349 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 RIOX1Q9H6W3 641 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 KCNK9Q9NPC2 374 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 GALNT8Q9NY28 637 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 TXNDC16Q9P2K2 825 aa5.56□□□□□ -1.52
PROM1-220ENST00000540805 AGTPBP1Q9UPW5 1226 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms