RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 RPF1Q9H9Y2 349 aaKnown RBP18.68■□□□□ 0.58
CLN6-202ENST00000538696 RBAKQ9NYW8 714 aaPredicted RBP18.68■□□□□ 0.58
CLN6-202ENST00000538696 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.68■□□□□ 0.58
CLN6-202ENST00000538696 GIT1Q9Y2X7 761 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 SLC4A7Q9Y6M7 1214 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 ITIH6Q6UXX5 1313 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 ZNF233A6NK53 670 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 UPP2O95045 317 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 EPB41P11171 864 aaKnown RBP18.67■□□□□ 0.58
CLN6-202ENST00000538696 YARSP54577 528 aaKnown RBP18.67■□□□□ 0.58
CLN6-202ENST00000538696 CYP24A1Q07973 514 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 FAM117BQ6P1L5 589 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 FRMD5Q7Z6J6 570 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 FAM186BQ8IYM0 893 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 PLEKHO2Q8TD55 490 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 HELQQ8TDG4 1101 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 ZFP42Q96MM3 310 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 GAD1Q99259 594 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 MKNK1Q9BUB5 465 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
CLN6-202ENST00000538696 FRMD4BQ9Y2L6 1034 aa18.67■□□□□ 0.58
CLN6-202ENST00000538696 TTC26A0AVF1 554 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 MAPK13O15264 365 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 INPPL1O15357 1258 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 OFD1O75665 1012 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 DGKIO75912 1065 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 BMP8BP34820 402 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 PSMC2P35998 433 aaKnown RBP18.66■□□□□ 0.58
CLN6-202ENST00000538696 AFF1P51825 1210 aaKnown RBP18.66■□□□□ 0.58
CLN6-202ENST00000538696 POU5F1Q01860 360 aaKnown RBP18.66■□□□□ 0.58
CLN6-202ENST00000538696 PPP2R3AQ06190 1150 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 HSP90AA2PQ14568 343 aaPredicted RBP18.66■□□□□ 0.58
CLN6-202ENST00000538696 XKR4Q5GH76 650 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 ALKAL1Q6UXT8 129 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 CCDC150Q8NCX0 1101 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 GSTCDQ8NEC7 633 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 BORCS6Q96GS4 357 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 MFSD14AQ96MC6 490 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 PRO3102Q9H379 93 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 NDST4Q9H3R1 872 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 RC3H2Q9HBD1 1191 aaKnown RBP18.66■□□□□ 0.58
CLN6-202ENST00000538696 UBN1Q9NPG3 1134 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 TOPORSQ9NS56 1045 aaPredicted RBP18.66■□□□□ 0.58
CLN6-202ENST00000538696 CNTN3Q9P232 1028 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 ARMCX3Q9UH62 379 aaPredicted RBP18.66■□□□□ 0.58
CLN6-202ENST00000538696 INPP5FQ9Y2H2 1132 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 ZKSCAN5Q9Y2L8 839 aa18.66■□□□□ 0.58
CLN6-202ENST00000538696 A0A1W2PQC6 194 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 ARL5CA6NH57 179 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 LACTBL1A8MY62 500 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 PTGESO14684 152 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 HOXA2O43364 376 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 PSMD6Q15008 389 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 SYCP1Q15431 976 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 FKBP15Q5T1M5 1219 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 GLB1LQ6UWU2 654 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 NLRC5Q86WI3 1866 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 PHOSPHO2Q8TCD6 241 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 FAM212AQ96EL1 285 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 CASD1Q96PB1 797 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 TMEM117Q9H0C3 514 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 PLEKHA5Q9HAU0 1116 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 PDE11AQ9HCR9 933 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 MIOSQ9NXC5 875 aa18.65■□□□□ 0.58
CLN6-202ENST00000538696 IL18RAPO95256 599 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 GJB5O95377 273 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 ATP2A2P16615 1042 aaKnown RBP18.64■□□□□ 0.57
CLN6-202ENST00000538696 KLK7P49862 253 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 SCNN1GP51170 649 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 GLRA4Q5JXX5 417 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 CHRDL2Q6WN34 429 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 ZSCAN30Q86W11 494 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 HERC6Q8IVU3 1022 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 LRRC8AQ8IWT6 810 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 EFCAB13Q8IY85 973 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 ZNF689Q96CS4 500 aaPredicted RBP18.64■□□□□ 0.57
CLN6-202ENST00000538696 ZMAT2Q96NC0 199 aaKnown RBP18.64■□□□□ 0.57
CLN6-202ENST00000538696 ERGIC2Q96RQ1 377 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 RPS6KC1Q96S38 1066 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 METTL14Q9HCE5 456 aaKnown RBP18.64■□□□□ 0.57
CLN6-202ENST00000538696 PLAGL2Q9UPG8 496 aa18.64■□□□□ 0.57
CLN6-202ENST00000538696 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.64■□□□□ 0.57
CLN6-202ENST00000538696 PTPRJQ12913 1337 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 SMIM28A0A1B0GU29 152 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 TBKBP1A7MCY6 615 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 NFICP08651 508 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 KCNE1P15382 129 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 HTRA4P83105 476 aaPredicted RBP18.63■□□□□ 0.57
CLN6-202ENST00000538696 CCZ1BP86790 482 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 CCZ1P86791 482 aaPredicted RBP18.63■□□□□ 0.57
CLN6-202ENST00000538696 BFSP1Q12934 665 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 PAN2Q504Q3 1202 aaKnown RBP18.63■□□□□ 0.57
CLN6-202ENST00000538696 NOMO2Q5JPE7 1267 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 FAM109BQ6ICB4 259 aaPredicted RBP18.63■□□□□ 0.57
CLN6-202ENST00000538696 JADE1Q6IE81 842 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 INTS8Q75QN2 995 aaKnown RBP18.63■□□□□ 0.57
CLN6-202ENST00000538696 PPFIBP1Q86W92 1011 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 CD302Q8IX05 232 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 ABI1Q8IZP0 508 aa18.63■□□□□ 0.57
CLN6-202ENST00000538696 CCDC127Q96BQ5 260 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms