RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 SNF8Q96H20 258 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 RBM41Q96IZ5 413 aaKnown RBP9.61□□□□□ -0.87
SNHG1-209ENST00000538654 GBP5Q96PP8 586 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 THAP2Q9H0W7 228 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 RIOX1Q9H6W3 641 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 LRRC19Q9H756 370 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 IFT122Q9HBG6 1241 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 KMT5AQ9NQR1 393 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 PRDM11Q9NQV5 511 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 NMRK1Q9NWW6 199 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 AJAP1Q9UKB5 411 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-209ENST00000538654 CHKBQ9Y259 395 aa9.61□□□□□ -0.87
SNHG1-209ENST00000538654 COL5A2P05997 1499 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-209ENST00000538654 E9PMD0 336 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 HGSO14964 777 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-209ENST00000538654 THAP12O43422 761 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 INMTO95050 263 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 GM2AP17900 193 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 PSMC4P43686 418 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 MPP2Q14168 576 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 DRAP1Q14919 205 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-209ENST00000538654 BMT2Q1RMZ1 405 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 OLIG1Q8TAK6 271 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 SLC7A6OSQ96CW6 309 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-209ENST00000538654 ARHGEF26Q96DR7 871 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 DENND2DQ9H6A0 471 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-209ENST00000538654 RMI1Q9H9A7 625 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 PIDD1Q9HB75 910 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 ARNT2Q9HBZ2 717 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 DNAJC12Q9UKB3 198 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 PHTF1Q9UMS5 762 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 PIP5K1CO60331 668 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 ZWINTO95229 277 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 EPHB2P29323 1055 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 MOGSQ13724 837 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 RCN2Q14257 317 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 SPARCL1Q14515 664 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 SLC45A4Q5BKX6 768 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 RNF220Q5VTB9 566 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 DZIP1Q86YF9 867 aaKnown RBP9.6□□□□□ -0.87
SNHG1-209ENST00000538654 SRRM1Q8IYB3 904 aaKnown RBP9.6□□□□□ -0.87
SNHG1-209ENST00000538654 SVIPQ8NHG7 77 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 ZNF398Q8TD17 642 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 GRK7Q8WTQ7 553 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 HAS1Q92839 578 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 DYNLL2Q96FJ2 89 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 NLRP3Q96P20 1036 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 DHX36Q9H2U1 1008 aaKnown RBP9.6□□□□□ -0.87
SNHG1-209ENST00000538654 VAT1LQ9HCJ6 419 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 SEPT11Q9NVA2 429 aaKnown RBP9.6□□□□□ -0.87
SNHG1-209ENST00000538654 CHCHD3Q9NX63 227 aaKnown RBP9.6□□□□□ -0.87
SNHG1-209ENST00000538654 COG5Q9UP83 839 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 PTPN22Q9Y2R2 807 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 SLC4A7Q9Y6M7 1214 aa9.6□□□□□ -0.87
SNHG1-209ENST00000538654 NAV1Q8NEY1 1877 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 NPHP3-ACAD11A0A0J9YXS1 232 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 A0A1W2PRG0 241 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 A6NCN8 305 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 H0Y3Z8 333 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 UPP2O95045 317 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 KCNA3P22001 575 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 FOXN2P32314 431 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 CACNA2D1P54289 1103 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 SLC12A3P55017 1021 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 GPC5P78333 572 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 CDR2Q01850 454 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 CTTNQ14247 550 aaKnown RBP9.59□□□□□ -0.87
SNHG1-209ENST00000538654 KIF22Q14807 665 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 ZC3H12AQ5D1E8 599 aaKnown RBP9.59□□□□□ -0.87
SNHG1-209ENST00000538654 GJB7Q6PEY0 223 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 RHBDF2Q6PJF5 856 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 BBOF1Q8ND07 529 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 FLCNQ8NFG4 579 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 C8orf48Q96LL4 319 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 NR1H4Q96RI1 486 aaPredicted RBP9.59□□□□□ -0.87
SNHG1-209ENST00000538654 FRMPD4Q14CM0 1322 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 SIGLEC16A6NMB1 481 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 ANKRD63C9JTQ0 380 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 CCDC22O60826 627 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 ENTPD5O75356 428 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 MTA2O94776 668 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 GAS8O95995 478 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 PSMC2P35998 433 aaKnown RBP9.59□□□□□ -0.87
SNHG1-209ENST00000538654 CRTC2Q53ET0 693 aaPredicted RBP9.59□□□□□ -0.87
SNHG1-209ENST00000538654 SNX30Q5VWJ9 437 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 FYB2Q5VWT5 728 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 USP17L2Q6R6M4 530 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 C4orf50Q6ZRC1 276 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 RNF207Q6ZRF8 634 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 FAM47EQ6ZV65 393 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 NEDD1Q8NHV4 660 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 TTC8Q8TAM2 541 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 KRT35Q92764 455 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 PTPRN2Q92932 1015 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 MKNK1Q9BUB5 465 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 CPVLQ9H3G5 476 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 AAASQ9NRG9 546 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 SENP1Q9P0U3 644 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 ASIC3Q9UHC3 531 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 ZFP69BQ9UJL9 534 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms