RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ATP4AP20648 1035 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 OSBPP22059 807 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 PTGIRP43119 386 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 DRG2P55039 364 aaKnown RBP9.93□□□□□ -0.82
DDB1-211ENST00000538280 DHX34Q14147 1143 aaKnown RBP9.93□□□□□ -0.82
DDB1-211ENST00000538280 PSMD6Q15008 389 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 CYP1B1Q16678 543 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 PTPROQ16827 1216 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 GNPTABQ3T906 1256 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 TUBB8Q3ZCM7 444 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 SMYD5Q6GMV2 418 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 SWSAP1Q6NVH7 229 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 MIS18BP1Q6P0N0 1132 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 C17orf99Q6UX52 265 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 KDM7AQ6ZMT4 941 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 SV2AQ7L0J3 742 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.93□□□□□ -0.82
DDB1-211ENST00000538280 USP37Q86T82 979 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 CHST13Q8NET6 341 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 DNERQ8NFT8 737 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 TAS1R2Q8TE23 839 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 ZBTB9Q96C00 473 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 LRRC45Q96CN5 670 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 RUFY1Q96T51 708 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 POLR3FQ9H1D9 316 aaPredicted RBP9.93□□□□□ -0.82
DDB1-211ENST00000538280 PRO3102Q9H379 93 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 DHX33Q9H6R0 707 aaKnown RBP9.93□□□□□ -0.82
DDB1-211ENST00000538280 TMBIM4Q9HC24 238 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 ERVK-5Q9HDB9 667 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 TOPORSQ9NS56 1045 aaPredicted RBP9.93□□□□□ -0.82
DDB1-211ENST00000538280 CTTNBP2NLQ9P2B4 639 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 UVRAGQ9P2Y5 699 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 NR2E1Q9Y466 385 aa9.93□□□□□ -0.82
DDB1-211ENST00000538280 PLXNB2O15031 1838 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 SRRM3A6NNA2 597 aaPredicted RBP9.92□□□□□ -0.82
DDB1-211ENST00000538280 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
DDB1-211ENST00000538280 SOX1O00570 391 aaPredicted RBP9.92□□□□□ -0.82
DDB1-211ENST00000538280 PHF2O75151 1096 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 PPFIA4O75335 1185 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 OATP04181 439 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 MMEP08473 750 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 CETPP11597 493 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 EDNRBP24530 442 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 CTNNA1P35221 906 aaKnown RBP9.92□□□□□ -0.82
DDB1-211ENST00000538280 ARL2P36404 184 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 HSD17B3P37058 310 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 NAMPTP43490 491 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 PDE6CP51160 858 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 IRAK1P51617 712 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 GUCY2FP51841 1108 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 PPIL2Q13356 520 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 MTMR3Q13615 1198 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 EMC2Q15006 297 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 CLEC16AQ2KHT3 1053 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 ZACNQ401N2 412 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 DUPD1Q68J44 220 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 ACAD10Q6JQN1 1059 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 SLC47A2Q86VL8 602 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 DDX42Q86XP3 938 aaKnown RBP eCLIP9.92□□□□□ -0.82
DDB1-211ENST00000538280 ZNF677Q86XU0 584 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 ERO1BQ86YB8 467 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 PPM1KQ8N3J5 372 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 C12orf50Q8NA57 414 aaPredicted RBP9.92□□□□□ -0.82
DDB1-211ENST00000538280 PSPC1Q8WXF1 523 aaKnown RBP9.92□□□□□ -0.82
DDB1-211ENST00000538280 POMGNT1Q8WZA1 660 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 KRT35Q92764 455 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 IFT74Q96LB3 600 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 NIFKQ9BYG3 293 aaKnown RBP9.92□□□□□ -0.82
DDB1-211ENST00000538280 RAB17Q9H0T7 212 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 PORCNQ9H237 461 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 AVENQ9NQS1 362 aaPredicted RBP9.92□□□□□ -0.82
DDB1-211ENST00000538280 SEPT11Q9NVA2 429 aaKnown RBP9.92□□□□□ -0.82
DDB1-211ENST00000538280 HOXC10Q9NYD6 342 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 TMOD4Q9NZQ9 345 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 SEPT9Q9UHD8 586 aaPredicted RBP9.92□□□□□ -0.82
DDB1-211ENST00000538280 AMACRQ9UHK6 382 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 GABRQQ9UN88 632 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 TRPC6Q9Y210 931 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 PLAAQ9Y263 795 aa9.92□□□□□ -0.82
DDB1-211ENST00000538280 GOLGA6L10A0A0M3HER8 536 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 HMGB1P1B2RPK0 211 aaPredicted RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 PDHXO00330 501 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 EIF3HO15372 352 aaKnown RBP eCLIP9.91□□□□□ -0.82
DDB1-211ENST00000538280 DAPK3O43293 454 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 ZEB2O60315 1214 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 PPFIA2O75334 1257 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 C4BPAP04003 597 aaKnown RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 UNGP13051 313 aaPredicted RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 CCL5P13501 91 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 ACO1P21399 889 aaKnown RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 COMTP21964 271 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 CHRNA3P32297 505 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 PSMC4P43686 418 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 MARCKSL1P49006 195 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 ALDH5A1P51649 535 aaPredicted RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 SP2Q02086 613 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 PRKCZQ05513 592 aa9.91□□□□□ -0.82
DDB1-211ENST00000538280 ZNF211Q13398 564 aaPredicted RBP9.91□□□□□ -0.82
DDB1-211ENST00000538280 SNAPC2Q13487 334 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms