RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 SEL1LQ9UBV2 794 aa23.45■■□□□ 1.34
CCDC78-215ENST00000538176 K7ENM7 598 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 HNRNPDLO14979 420 aaKnown RBP23.44■■□□□ 1.34
CCDC78-215ENST00000538176 PPP6R2O75170 966 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 PAPLNO95428 1278 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 GTF2BQ00403 316 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 STK38Q15208 465 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 SPECC1Q5M775 1068 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 RTP2Q5QGT7 225 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 LILRA6Q6PI73 481 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 RTL10Q7L3V2 364 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 OTOP3Q7RTS5 596 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 ZDHHC14Q8IZN3 488 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 LNX1Q8TBB1 728 aaPredicted RBP23.44■■□□□ 1.34
CCDC78-215ENST00000538176 STAMQ92783 540 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 CXCL16Q9H2A7 254 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 HCN4Q9Y3Q4 1203 aa23.44■■□□□ 1.34
CCDC78-215ENST00000538176 CCDC195A0A1B0GUA6 201 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 TGM5O43548 720 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 FGFR3P22607 806 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 PSMD5Q16401 504 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 CCDC149Q6ZUS6 474 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 USP49Q70CQ1 688 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 PALB2Q86YC2 1186 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 TDRD5Q8NAT2 981 aaKnown RBP23.43■■□□□ 1.34
CCDC78-215ENST00000538176 LINC00301Q8NCQ3 95 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 LRRC15Q8TF66 581 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 HASPINQ8TF76 798 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 B3GALT6Q96L58 329 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 CLIC6Q96NY7 704 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 TSHZ2Q9NRE2 1034 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 CACNG4Q9UBN1 327 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 TRIP11Q15643 1979 aa23.43■■□□□ 1.34
CCDC78-215ENST00000538176 CITO14578 2027 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 XPOTO43592 962 aaKnown RBP23.42■■□□□ 1.34
CCDC78-215ENST00000538176 HARSP12081 509 aaKnown RBP23.42■■□□□ 1.34
CCDC78-215ENST00000538176 GAP43P17677 238 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 ZXDAP98168 799 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 SLC10A6Q3KNW5 377 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 ATL3Q6DD88 541 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 SLFN12LQ6IEE8 588 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 ANKS3Q6ZW76 656 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 BMP8AQ7Z5Y6 402 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 CD302Q8IX05 232 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 HVCN1Q96D96 273 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 LRRC27Q9C0I9 530 aa23.42■■□□□ 1.34
CCDC78-215ENST00000538176 MTCL1Q9Y4B5 1905 aaKnown RBP23.41■■□□□ 1.34
CCDC78-215ENST00000538176 FAM86C2PA6NEL3 165 aa23.41■■□□□ 1.34
CCDC78-215ENST00000538176 SPTLC2O15270 562 aa23.41■■□□□ 1.34
CCDC78-215ENST00000538176 YEATS4O95619 227 aa23.41■■□□□ 1.34
CCDC78-215ENST00000538176 POU5F1Q01860 360 aaKnown RBP23.41■■□□□ 1.34
CCDC78-215ENST00000538176 PTPN21Q16825 1174 aa23.41■■□□□ 1.34
CCDC78-215ENST00000538176 PRSS55Q6UWB4 352 aaPredicted RBP23.41■■□□□ 1.34
CCDC78-215ENST00000538176 MAP4K3Q8IVH8 894 aa23.41■■□□□ 1.34
CCDC78-215ENST00000538176 KREMEN2Q8NCW0 462 aa23.41■■□□□ 1.34
CCDC78-215ENST00000538176 DDX12PQ92771 950 aa23.41■■□□□ 1.34
CCDC78-215ENST00000538176 MFSD14AQ96MC6 490 aa23.41■■□□□ 1.34
CCDC78-215ENST00000538176 ZMAT2Q96NC0 199 aaKnown RBP23.41■■□□□ 1.34
CCDC78-215ENST00000538176 CLSTN3Q9BQT9 956 aa23.41■■□□□ 1.34
CCDC78-215ENST00000538176 BACE2Q9Y5Z0 518 aa23.41■■□□□ 1.34
CCDC78-215ENST00000538176 PODXLO00592 558 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 SYN3O14994 580 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 OGTO15294 1046 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 WEE2P0C1S8 567 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 CYP3A5P20815 502 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 STAT6P42226 847 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 UVSSAQ2YD98 709 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 KANK3Q6NY19 840 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 TRIM67Q6ZTA4 783 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 ZNF720Q7Z2F6 126 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 UBALD2Q8IYN6 164 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 FIZ1Q96SL8 496 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 WDR6Q9NNW5 1121 aaKnown RBP23.4■■□□□ 1.34
CCDC78-215ENST00000538176 NUB1Q9Y5A7 615 aa23.4■■□□□ 1.34
CCDC78-215ENST00000538176 A0A0B4J269 797 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 TTC26A0AVF1 554 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 C2CD4DB7Z1M9 353 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 ZMYND10O75800 440 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 HNRNPA1P09651 372 aaKnown RBP eCLIP23.39■■□□□ 1.33
CCDC78-215ENST00000538176 PAX3P23760 479 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 PPP2R3AQ06190 1150 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 SOX4Q06945 474 aaPredicted RBP23.39■■□□□ 1.33
CCDC78-215ENST00000538176 SIGLEC14Q08ET2 396 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 RAB33AQ14088 237 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 POSTNQ15063 836 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 LIN9Q5TKA1 542 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 DYMQ7RTS9 669 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 PRKD2Q9BZL6 878 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 CUEDC2Q9H467 287 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 RPF1Q9H9Y2 349 aaKnown RBP23.39■■□□□ 1.33
CCDC78-215ENST00000538176 PIDD1Q9HB75 910 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 GOLGA2P5Q9HBQ8 144 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 MTRRQ9UBK8 725 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 UBQLN1Q9UMX0 589 aaKnown RBP23.39■■□□□ 1.33
CCDC78-215ENST00000538176 EXOC7Q9UPT5 735 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 SORCS3Q9UPU3 1222 aa23.39■■□□□ 1.33
CCDC78-215ENST00000538176 ADRB2P07550 413 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 ZSCAN22P10073 491 aaPredicted RBP23.38■■□□□ 1.33
CCDC78-215ENST00000538176 RPL17P18621 184 aaKnown RBP23.38■■□□□ 1.33
CCDC78-215ENST00000538176 HOXA9P31269 272 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms