RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 RHPN2Q8IUC4 686 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 ENKURQ8TC29 256 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 DIS3LQ8TF46 1054 aaKnown RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 C9orf72Q96LT7 481 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 MKNK1Q9BUB5 465 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 RXFP1Q9HBX9 757 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 WDR70Q9NW82 654 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 DUOX2Q9NRD8 1548 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 MMP1P03956 469 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 RASGRF1Q13972 1273 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 CHI3L2Q15782 390 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 RNF19BQ6ZMZ0 732 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 MAGEB18Q96M61 343 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 SETDB2Q96T68 719 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 ROGDIQ9GZN7 287 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 ADAM22Q9P0K1 906 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 NPC1L1Q9UHC9 1359 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CDH16O75309 829 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 DDAH1O94760 285 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ARPP19P56211 112 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 KCNMA1Q12791 1236 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 GCKRQ14397 625 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 IMPG1Q17R60 797 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 PERM1Q5SV97 790 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 SYDE1Q6ZW31 735 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CLVS1Q8IUQ0 354 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 EGFL6Q8IUX8 553 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 RNF25Q96BH1 459 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 EPAS1Q99814 870 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 C17orf80Q9BSJ5 609 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 SELENONQ9NZV5 590 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 GUCY1B2O75343 617 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 NR1D2Q14995 579 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 SHCBP1LQ9BZQ2 653 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 PCMTD2Q9NV79 361 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 USE1Q9NZ43 259 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CLIC5Q9NZA1 410 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 WDR81Q562E7 1941 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 NUDT2P50583 147 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ITGADQ13349 1161 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 PRKG1Q13976 671 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF618Q5T7W0 954 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 RSRC2Q7L4I2 434 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 NLRP9Q7RTR0 991 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 MAPKAPK5Q8IW41 473 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 SLC25A41Q8N5S1 370 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 DMAP1Q9NPF5 467 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF446Q9NWS9 450 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 TPST1O60507 370 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 KRT36O76013 467 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 BAIAP3O94812 1187 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 SEMA3DO95025 777 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CFBP00751 764 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 MYL2P10916 166 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 GALK1P51570 392 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 MPP6Q9NZW5 540 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF180Q9UJW8 692 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 RALGAPA1Q6GYQ0 2036 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CCDC78A2IDD5 438 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 MEIS1O00470 390 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 SH2B2O14492 632 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 PHF2O75151 1096 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 RASSF9O75901 435 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CDC37Q16543 378 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 SCARA5Q6ZMJ2 495 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 C19orf18Q8NEA5 215 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ITFG2Q969R8 447 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 RBM15Q96T37 977 aaKnown RBP eCLIP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 KLHL11Q9NVR0 708 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 BSDC1Q9NW68 430 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 IMPAD1Q9NX62 359 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ATP6V1HQ9UI12 483 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CDY2AQ9Y6F7 541 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CDY1Q9Y6F8 540 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 BFSP2Q13515 415 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 MAPRE1Q15691 268 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 SLC10A4Q96EP9 437 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 NGRNQ9NPE2 291 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 PRG3Q9Y2Y8 225 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CACNA1SQ13698 1873 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 POTEFA5A3E0 1075 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ETS2P15036 469 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 MAPK10P53779 464 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 TFAMQ00059 246 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 PUDPQ08623 228 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 THOC7Q6I9Y2 204 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 PPP1R2P3Q6NXS1 205 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 GIPC3Q8TF64 312 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 MANSC1Q9H8J5 431 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 GJB4Q9NTQ9 266 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 RABGEF1Q9UJ41 708 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 LRRIQ4A6NIV6 560 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ELF3P78545 371 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ROR1Q01973 937 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 MCL1Q07820 350 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 OVGP1Q12889 678 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 TRIP4Q15650 581 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ZYXQ15942 572 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 PROM2Q8N271 834 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms