RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 IVDP26440 423 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 GCLMP48507 274 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 ITGA8P53708 1063 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 SF3A3Q12874 501 aaKnown RBP eCLIP12.96□□□□□ -0.345e-6■■■□□ 15
CPSF7-218ENST00000537641 NR1H3Q13133 447 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 SPDYE2Q495Y8 402 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 ACAD10Q6JQN1 1059 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 CGB2Q6NT52 195 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.96□□□□□ -0.34
CPSF7-218ENST00000537641 SPICE1Q8N0Z3 855 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 FITM2Q8N6M3 262 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 RDH13Q8NBN7 331 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 THOC1Q96FV9 657 aaKnown RBP12.96□□□□□ -0.34
CPSF7-218ENST00000537641 FAM81BQ96LP2 452 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 KREMEN1Q96MU8 473 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 IWS1Q96ST2 819 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 LXNQ9BS40 222 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 DCLK3Q9C098 648 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 TMEM117Q9H0C3 514 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 VPS33BQ9H267 617 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 AVENQ9NQS1 362 aaPredicted RBP12.96□□□□□ -0.34
CPSF7-218ENST00000537641 SLC5A4Q9NY91 659 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 HSPBP1Q9NZL4 362 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 L3MBTL1Q9Y468 752 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 COL4A5P29400 1685 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 CLRN2A0PK11 232 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 TBC1D12O60347 775 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 PLA2G6O60733 806 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 UNC5CO95185 931 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 POLR2MP0CAP2 368 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 CREB1P16220 341 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 ECE1P42892 770 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 SLC1A1P43005 524 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 IL9RQ01113 521 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 PTP4A2Q12974 167 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
CPSF7-218ENST00000537641 ZKSCAN8Q15776 578 aaPredicted RBP12.95□□□□□ -0.34
CPSF7-218ENST00000537641 CEP55Q53EZ4 464 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 BZW1Q7L1Q6 419 aaKnown RBP12.95□□□□□ -0.34
CPSF7-218ENST00000537641 ANKRD35Q8N283 1001 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 LARGE2Q8N3Y3 721 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 CHURC1Q8WUH1 139 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 C1orf54Q8WWF1 131 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 KIFAP3Q92845 792 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 KAT5Q92993 513 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 TRIM11Q96F44 468 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 BTBD6Q96KE9 485 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 ZNF570Q96NI8 536 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 ZNF577Q9BSK1 485 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 TIPINQ9BVW5 301 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 UBN1Q9NPG3 1134 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 EURLQ9NYK6 297 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 WRAP73Q9P2S5 460 aaPredicted RBP12.95□□□□□ -0.34
CPSF7-218ENST00000537641 ANAPC5Q9UJX4 755 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 STARD13Q9Y3M8 1113 aa12.95□□□□□ -0.34
CPSF7-218ENST00000537641 E7ENQ6 273 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 ZBTB39O15060 712 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 MAGEB2O15479 319 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 DIAPH2O60879 1101 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 RAD17O75943 681 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 CYP11B1P15538 503 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 ATP2A2P16615 1042 aaKnown RBP12.94□□□□□ -0.34
CPSF7-218ENST00000537641 TAC1P20366 129 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-218ENST00000537641 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 RGS9BPQ6ZS82 235 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 CPNE8Q86YQ8 564 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 AGGF1Q8N302 714 aaeCLIP12.94□□□□□ -0.34
CPSF7-218ENST00000537641 MTMR14Q8NCE2 650 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 SLC17A8Q8NDX2 589 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 ATL2Q8NHH9 583 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 GDAP1Q8TB36 358 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 ACER1Q8TDN7 264 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 PRCCQ92733 491 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-218ENST00000537641 FAM212AQ96EL1 285 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 RMDN2Q96LZ7 410 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 POP1Q99575 1024 aaKnown RBP12.94□□□□□ -0.34
CPSF7-218ENST00000537641 RIT2Q99578 217 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 RANBP17Q9H2T7 1088 aaKnown RBP12.94□□□□□ -0.34
CPSF7-218ENST00000537641 PCIF1Q9H4Z3 704 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 CHST7Q9NS84 486 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 ADAM22Q9P0K1 906 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 CTNNAL1Q9UBT7 734 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 GGT7Q9UJ14 662 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 PNMA3Q9UL41 463 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 COQ4Q9Y3A0 265 aa12.94□□□□□ -0.34
CPSF7-218ENST00000537641 CLGNO14967 610 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 CYP26A1O43174 497 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 MYBL1P10243 752 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 PLS3P13797 630 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 TAL1P17542 331 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-218ENST00000537641 PAX7P23759 505 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 MAPK4P31152 587 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 POLGP54098 1239 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-218ENST00000537641 SLC18A1P54219 525 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 IRX1P78414 480 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-218ENST00000537641 MPP2Q14168 576 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 KYNUQ16719 465 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 CLEC16AQ2KHT3 1053 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 CMPK2Q5EBM0 449 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms