RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 GLUD1P00367 558 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 SSBP05455 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCDC60-202ENST00000535685 MCF2P10911 925 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 PLS3P13797 630 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 PDCP20941 246 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 PDXDC1Q6P996 788 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 HFE2Q6ZVN8 426 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 C12orf76Q8N812 135 aaPredicted RBP11.85□□□□□ -0.51
CCDC60-202ENST00000535685 PIK3R5Q8WYR1 880 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 INTS4Q96HW7 963 aaKnown RBP11.85□□□□□ -0.51
CCDC60-202ENST00000535685 UROC1Q96N76 676 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 POLD4Q9HCU8 107 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 KMT5AQ9NQR1 393 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 MORC2Q9Y6X9 1032 aaPredicted RBP11.85□□□□□ -0.51
CCDC60-202ENST00000535685 KMT2EQ8IZD2 1858 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 NOTCH4Q99466 2003 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 TMEM221A6NGB7 291 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 CCDC169A6NNP5 214 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 C2CD4DB7Z1M9 353 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 H0YCG3 227 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 M0R296 226 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 PLA2G4BP0C869 781 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 HOXB1P14653 301 aaPredicted RBP11.84□□□□□ -0.51
CCDC60-202ENST00000535685 KCNE1P15382 129 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 LONP1P36776 959 aaKnown RBP11.84□□□□□ -0.51
CCDC60-202ENST00000535685 SMTNP53814 917 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 DCLRE1AQ6PJP8 1040 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 TMC5Q6UXY8 1006 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 ZPBP2Q6X784 338 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 RTL10Q7L3V2 364 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 OTOP3Q7RTS5 596 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 UBALD2Q8IYN6 164 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 TMEM161BQ8NDZ6 487 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 ASIC4Q96FT7 647 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 PAAF1Q9BRP4 392 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 TTPALQ9BTX7 342 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 CCDC94Q9BW85 323 aaPredicted RBP11.84□□□□□ -0.51
CCDC60-202ENST00000535685 BACH2Q9BYV9 841 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 CDT1Q9H211 546 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 CXCL16Q9H2A7 254 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 MAN1C1Q9NR34 630 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 TOPORSQ9NS56 1045 aaPredicted RBP11.84□□□□□ -0.51
CCDC60-202ENST00000535685 ZDHHC7Q9NXF8 308 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 CDH22Q9UJ99 828 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 ODF2LQ9ULJ1 636 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 USP20Q9Y2K6 914 aa11.84□□□□□ -0.51
CCDC60-202ENST00000535685 SMIM28A0A1B0GU29 152 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 CASTOR2A6NHX0 329 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 C2CD2LO14523 706 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 TOM1L1O75674 476 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 KIF4AO95239 1232 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 MAPTP10636 758 aaKnown RBP11.83□□□□□ -0.52
CCDC60-202ENST00000535685 LIG1P18858 919 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 FGFR3P22607 806 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 UBA7P41226 1012 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 ZNF131P52739 623 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 NCKAP1LP55160 1127 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 ARSHQ5FYA8 562 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 KANK3Q6NY19 840 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 MPZL3Q6UWV2 235 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 CD300LGQ6UXG3 332 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.83□□□□□ -0.52
CCDC60-202ENST00000535685 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 TDRD5Q8NAT2 981 aaKnown RBP11.83□□□□□ -0.52
CCDC60-202ENST00000535685 LNX1Q8TBB1 728 aaPredicted RBP11.83□□□□□ -0.52
CCDC60-202ENST00000535685 RIN2Q8WYP3 895 aaPredicted RBP11.83□□□□□ -0.52
CCDC60-202ENST00000535685 FAM122AQ96E09 287 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 CALML4Q96GE6 196 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 CDK5RAP3Q96JB5 506 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 TARS2Q9BW92 718 aaKnown RBP11.83□□□□□ -0.52
CCDC60-202ENST00000535685 CCSER1Q9C0I3 900 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 WDR6Q9NNW5 1121 aaKnown RBP11.83□□□□□ -0.52
CCDC60-202ENST00000535685 SLC38A7Q9NVC3 462 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 LARSQ9P2J5 1176 aaKnown RBP11.83□□□□□ -0.52
CCDC60-202ENST00000535685 SORCS3Q9UPU3 1222 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 GDAQ9Y2T3 454 aa11.83□□□□□ -0.52
CCDC60-202ENST00000535685 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.83□□□□□ -0.52
CCDC60-202ENST00000535685 MYH15Q9Y2K3 1946 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 CCDC195A0A1B0GUA6 201 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 SLC16A4O15374 487 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 TGM5O43548 720 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 POU2F2P09086 479 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 WEE2P0C1S8 567 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 ABCD1P33897 745 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 YARSP54577 528 aaKnown RBP11.82□□□□□ -0.52
CCDC60-202ENST00000535685 MTMR3Q13615 1198 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 SF3A1Q15459 793 aaKnown RBP11.82□□□□□ -0.52
CCDC60-202ENST00000535685 UPP1Q16831 310 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 ZNF568Q3ZCX4 644 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 RTP2Q5QGT7 225 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 FAM171A1Q5VUB5 890 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 PBXIP1Q96AQ6 731 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 ZNF707Q96C28 371 aaPredicted RBP11.82□□□□□ -0.52
CCDC60-202ENST00000535685 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
CCDC60-202ENST00000535685 SNX27Q96L92 541 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 ACAP3Q96P50 834 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 PRRX2Q99811 253 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 CLSTN3Q9BQT9 956 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 BLOC1S4Q9NUP1 217 aa11.82□□□□□ -0.52
CCDC60-202ENST00000535685 CNTN3Q9P232 1028 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms