RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 NT5DC1Q5TFE4 455 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 LIN9Q5TKA1 542 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 PRSS55Q6UWB4 352 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 PARM1Q6UWI2 310 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 SPATA31D4Q6ZUB0 917 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 CDR2LQ86X02 465 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 TCEAL8Q8IYN2 117 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 ZNF687Q8N1G0 1237 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 NECAB1Q8N987 351 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 SUMF1Q8NBK3 374 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 ZBTB44Q8NCP5 570 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 IER2Q9BTL4 223 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 SNTG2Q9NY99 539 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 KLK14Q9P0G3 267 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 RBM19Q9Y4C8 960 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 SMIM28A0A1B0GU29 152 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 LAD1O00515 517 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 SPTLC1O15269 473 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 ADAM12O43184 909 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 JAK2O60674 1132 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 SP9P0CG40 484 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 ATF2P15336 505 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 SCP2P22307 547 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 RPL9P32969 192 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 PRPHP41219 470 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 ID4P47928 161 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 GPC5P78333 572 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 SAFBQ15424 915 aaKnown RBP eCLIP12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 PPM1LQ5SGD2 360 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 EEF1DP3Q658K8 133 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 TPGS2Q68CL5 300 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 GRASPQ7Z6J2 395 aaPredicted RBP12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 NPAS3Q8IXF0 933 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 DNASE1L2Q92874 299 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 RPP25Q9BUL9 199 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 TIPINQ9BVW5 301 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 APOL6Q9BWW8 343 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 FAM126AQ9BYI3 521 aaPredicted RBP12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 CXCL16Q9H2A7 254 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 SLC38A7Q9NVC3 462 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 DLL3Q9NYJ7 618 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 DNMT3BQ9UBC3 853 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 TRIP11Q15643 1979 aa12.34□□□□□ -0.43
CLSTN3-206ENST00000535668 MYH15Q9Y2K3 1946 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 ARHGEF35A5YM69 484 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 CASTOR2A6NHX0 329 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 SHISA7A6NL88 538 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 LILRB5O75023 590 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 B3GAT3O94766 335 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 MCM7P33993 719 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 OR1D2P34982 312 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 NEK4P51957 841 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 EPHA5P54756 1037 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 HMGN5P82970 282 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 FZD5Q13467 585 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 SLC44A4Q53GD3 710 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 ATF7IP2Q5U623 682 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 GET4Q7L5D6 327 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 NOSTRINQ8IVI9 506 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 DAW1Q8N136 415 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 BEST2Q8NFU1 509 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 DEPTORQ8TB45 409 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 SPIRE2Q8WWL2 714 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 IFT74Q96LB3 600 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 TSPAN18Q96SJ8 248 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 ACO2Q99798 780 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 OXCT2Q9BYC2 517 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 TRPV4Q9HBA0 871 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 TOPORSQ9NS56 1045 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 CNTN3Q9P232 1028 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 PCDHGA2Q9Y5H1 932 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 CACNA1BQ00975 2339 aa12.33□□□□□ -0.44
CLSTN3-206ENST00000535668 K7ERI5 159 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 MCF2P10911 925 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 CLCNKBP51801 687 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 MLF2Q15773 248 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 ECM1Q16610 540 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 PABPC1LQ4VXU2 614 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 PRSS36Q5K4E3 855 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 HYIQ5T013 277 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 TAS1R3Q7RTX0 852 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 GPR161Q8N6U8 529 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 LEMD2Q8NC56 503 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 C3orf58Q8NDZ4 430 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 SLC7A14Q8TBB6 771 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 RUBCNQ92622 972 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 ELSPBP1Q96BH3 223 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 BHMT2Q9H2M3 363 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 KCND2Q9NZV8 630 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 CA14Q9ULX7 337 aa12.32□□□□□ -0.44
CLSTN3-206ENST00000535668 A0A087WWV3 80 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 SLC26A4O43511 780 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 ADRB2P07550 413 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 PAX3P23760 479 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 GUCY2CP25092 1073 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 NPTX2P47972 431 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 AARSP49588 968 aaKnown RBP eCLIP12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 MAPK7Q13164 816 aa12.31□□□□□ -0.44
CLSTN3-206ENST00000535668 TTC38Q5R3I4 469 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms