RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	LSP1	P33241	339 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TRHR	P34981	398 aa	Predicted RBP	5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	IL6ST	P40189	918 aa	Predicted RBP	5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SLC39A6	Q13433	755 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TMEM240	Q5SV17	173 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	GPR158	Q5T848	1215 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	MAP3K21	Q5TCX8	1036 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ESRP1	Q6NXG1	681 aa	Known RBP	5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SLC23A3	Q6PIS1	610 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CLEC4G	Q6UXB4	293 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	KCTD1	Q719H9	257 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	VSIG10L	Q86VR7	867 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	WDR75	Q8IWA0	830 aa	Known RBP	5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CHPF	Q8IZ52	775 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	NLGN4X	Q8N0W4	816 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ZNF610	Q8N9Z0	462 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	FLCN	Q8NFG4	579 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RUBCN	Q92622	972 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	COA7	Q96BR5	231 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RHOBTB2	Q9BYZ6	727 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SMOC1	Q9H4F8	434 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ADAMTS6	Q9UKP5	1117 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ZNF652	Q9Y2D9	606 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SIT1	Q9Y3P8	196 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ATP23	Q9Y6H3	246 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	NOTCH2	Q04721	2471 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ABCC4	O15439	1325 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	EVC2	Q86UK5	1308 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	FRMPD3	Q5JV73	1810 aa		5.69	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CEMIP	Q8WUJ3	1361 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RLF	Q13129	1914 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ST20-MTHFS	A0A0A6YYL1	179 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	E2F8	A0AVK6	867 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	HGS	O14964	777 aa	Predicted RBP	5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SGSM2	O43147	1006 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	HIP1R	O75146	1068 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	C4BPA	P04003	597 aa	Known RBP	5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SSTR4	P31391	388 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CD97	P48960	835 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	MTHFS	P49914	203 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	GALK1	P51570	392 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TBX4	P57082	545 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CYP4F8	P98187	520 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SIGLEC14	Q08ET2	396 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TUSC3	Q13454	348 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SNAPC2	Q13487	334 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	VGLL4	Q14135	290 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	LRRC32	Q14392	662 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PDCD1	Q15116	288 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	BICRAL	Q6AI39	1079 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SLC39A5	Q6ZMH5	540 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	C14orf80	Q86SX3	495 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	OXR1	Q8N573	874 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CYP2W1	Q8TAV3	490 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CLEC4D	Q8WXI8	215 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TRIB2	Q92519	343 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	FAXDC2	Q96IV6	333 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	COG3	Q96JB2	828 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SLC13A1	Q9BZW2	595 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ZDHHC5	Q9C0B5	715 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PCIF1	Q9H4Z3	704 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ACSS2	Q9NR19	701 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	KCNH7	Q9NS40	1196 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	MBNL3	Q9NUK0	354 aa	Known RBP	5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ASH2L	Q9UBL3	628 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ZNF180	Q9UJW8	692 aa		5.68	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RALGAPA2	Q2PPJ7	1873 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TCRBV5S2	A0A599	114 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PRPF3	O43395	683 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PCDHGA12	O60330	932 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	BUB1B	O60566	1050 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ADAMTS4	O75173	837 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	MAP4K4	O95819	1239 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	IGHA1	P01876	353 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CYP2C8	P10632	490 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RBP3	P10745	1247 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ZSCAN20	P17040	1043 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PTPN1	P18031	435 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CCND3	P30281	292 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	GDNF	P39905	211 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	GPR3	P46089	330 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SCAND1	P57086	179 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TMEM132B	Q14DG7	1078 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SUPT20HL1	Q3ZLR7	823 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CATSPERE	Q5SY80	951 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	EP400NL	Q6ZTU2	488 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ANKRD23	Q86SG2	305 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	MYO1H	Q8N1T3	1032 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TMEM105	Q8N8V8	129 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	LMBR1	Q8WVP7	490 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	JPH3	Q8WXH2	748 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ARNTL2	Q8WYA1	636 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SEC14L1	Q92503	715 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CCDC120	Q96HB5	630 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	C16orf92	Q96LL3	132 aa		5.67	□□□□□ -1.5

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