RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 SLC38A7Q9NVC3 462 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 TBC1D7Q9P0N9 293 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 SERTAD1Q9UHV2 236 aa23.3■■□□□ 1.32
PKP3-211ENST00000534401 VWA8A3KMH1 1905 aa23.29■■□□□ 1.32
PKP3-211ENST00000534401 CASTOR2A6NHX0 329 aa23.29■■□□□ 1.32
PKP3-211ENST00000534401 TISP43B9A030 160 aa23.29■■□□□ 1.32
PKP3-211ENST00000534401 H3BQ06 376 aaPredicted RBP23.29■■□□□ 1.32
PKP3-211ENST00000534401 C1RP00736 705 aa23.29■■□□□ 1.32
PKP3-211ENST00000534401 MYBP10242 640 aa23.29■■□□□ 1.32
PKP3-211ENST00000534401 HARSP12081 509 aaKnown RBP23.29■■□□□ 1.32
PKP3-211ENST00000534401 TNFSF9P41273 254 aa23.29■■□□□ 1.32
PKP3-211ENST00000534401 ENOX2Q16206 610 aaKnown RBP23.29■■□□□ 1.32
PKP3-211ENST00000534401 ZBTB41Q5SVQ8 909 aa23.29■■□□□ 1.32
PKP3-211ENST00000534401 RABGGTAQ92696 567 aa23.29■■□□□ 1.32
PKP3-211ENST00000534401 DDX27Q96GQ7 796 aaKnown RBP23.29■■□□□ 1.32
PKP3-211ENST00000534401 SSX2IPQ9Y2D8 614 aa23.29■■□□□ 1.32
PKP3-211ENST00000534401 KIF4AO95239 1232 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 GCNT3O95395 438 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 CXCL8P10145 99 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 IGFBP6P24592 240 aaPredicted RBP23.28■■□□□ 1.32
PKP3-211ENST00000534401 HOXD13P35453 343 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 RBM10P98175 930 aaKnown RBP23.28■■□□□ 1.32
PKP3-211ENST00000534401 POSTNQ15063 836 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 USP41Q3LFD5 358 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 SMRP1Q8NCR6 262 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 PAGE5Q96GU1 130 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 KLHL5Q96PQ7 755 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 MSTO1Q9BUK6 570 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 MRPL17Q9NRX2 175 aaKnown RBP23.28■■□□□ 1.32
PKP3-211ENST00000534401 CIZ1Q9ULV3 898 aaPredicted RBP23.28■■□□□ 1.32
PKP3-211ENST00000534401 EXOC7Q9UPT5 735 aa23.28■■□□□ 1.32
PKP3-211ENST00000534401 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.28■■□□□ 1.32
PKP3-211ENST00000534401 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.27■■□□□ 1.32
PKP3-211ENST00000534401 EIF3DO15371 548 aaKnown RBP eCLIP23.27■■□□□ 1.32
PKP3-211ENST00000534401 KLRC4O43908 158 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 TADA2AO75478 443 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 CNPP09543 421 aaKnown RBP23.27■■□□□ 1.32
PKP3-211ENST00000534401 RPL9P32969 192 aaKnown RBP23.27■■□□□ 1.32
PKP3-211ENST00000534401 GLUD2P49448 558 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 CLCNKBP51801 687 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 NDUFA8P51970 172 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 ASIC1P78348 528 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 CUL4BQ13620 913 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 PTCRAQ6ISU1 281 aaPredicted RBP23.27■■□□□ 1.32
PKP3-211ENST00000534401 CRELD2Q6UXH1 353 aaPredicted RBP23.27■■□□□ 1.32
PKP3-211ENST00000534401 CD302Q8IX05 232 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 GLIS3Q8NEA6 775 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 ZNF507Q8TCN5 953 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 CD207Q9UJ71 328 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 AGO2Q9UKV8 859 aaKnown RBP23.27■■□□□ 1.32
PKP3-211ENST00000534401 HCFC2Q9Y5Z7 792 aa23.27■■□□□ 1.32
PKP3-211ENST00000534401 SF3B1O75533 1304 aaKnown RBP eCLIP23.27■■□□□ 1.321e-6■■■■■ 135.5
PKP3-211ENST00000534401 MTCL1Q9Y4B5 1905 aaKnown RBP23.26■■□□□ 1.31
PKP3-211ENST00000534401 LACTBL1A8MY62 500 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 MBTPS2O43462 519 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 MYL1P05976 194 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 URODP06132 367 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 CYP3A5P20815 502 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 GARTP22102 1010 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 CASP1P29466 404 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 MATR3P43243 847 aaKnown RBP eCLIP23.26■■□□□ 1.31
PKP3-211ENST00000534401 NDUFV1P49821 464 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 ELAVL2Q12926 359 aaKnown RBP23.26■■□□□ 1.31
PKP3-211ENST00000534401 SMAD4Q13485 552 aaKnown RBP23.26■■□□□ 1.31
PKP3-211ENST00000534401 SYCE2Q6PIF2 218 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 CEP57L1Q8IYX8 460 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 C3orf58Q8NDZ4 430 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 ADAMTS19Q8TE59 1207 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 HPS3Q969F9 1004 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 S1PR5Q9H228 398 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 TMEM206Q9H813 350 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 GOLGA2P5Q9HBQ8 144 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 GDPD2Q9HCC8 539 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 FNIP2Q9P278 1114 aa23.26■■□□□ 1.31
PKP3-211ENST00000534401 BARX2Q9UMQ3 279 aaPredicted RBP23.26■■□□□ 1.31
PKP3-211ENST00000534401 PRPF6O94906 941 aaKnown RBP23.25■■□□□ 1.31
PKP3-211ENST00000534401 HOXB8P17481 243 aaPredicted RBP23.25■■□□□ 1.31
PKP3-211ENST00000534401 LRPAP1P30533 357 aa23.25■■□□□ 1.31
PKP3-211ENST00000534401 SYKP43405 635 aa23.25■■□□□ 1.31
PKP3-211ENST00000534401 SMAD2Q15796 467 aaKnown RBP23.25■■□□□ 1.31
PKP3-211ENST00000534401 FAM26FQ5R3K3 315 aa23.25■■□□□ 1.31
PKP3-211ENST00000534401 ANKRD54Q6NXT1 300 aa23.25■■□□□ 1.31
PKP3-211ENST00000534401 PPFIBP1Q86W92 1011 aa23.25■■□□□ 1.31
PKP3-211ENST00000534401 GRAMD1CQ8IYS0 662 aa23.25■■□□□ 1.31
PKP3-211ENST00000534401 CASP10Q92851 521 aa23.25■■□□□ 1.31
PKP3-211ENST00000534401 C18orf25Q96B23 403 aaPredicted RBP23.25■■□□□ 1.31
PKP3-211ENST00000534401 BLZF1Q9H2G9 400 aa23.25■■□□□ 1.31
PKP3-211ENST00000534401 GOLPH3LQ9H4A5 285 aa23.25■■□□□ 1.31
PKP3-211ENST00000534401 RPF1Q9H9Y2 349 aaKnown RBP23.25■■□□□ 1.31
PKP3-211ENST00000534401 PAPLNO95428 1278 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 FGFR3P22607 806 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 AFMP43652 599 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 CLCN4P51793 760 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 BMT2Q1RMZ1 405 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 EP400NLQ6ZTU2 488 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 STXBP4Q6ZWJ1 553 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 FSIP1Q8NA03 581 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 PIK3R5Q8WYR1 880 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 SUSD6Q92537 303 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 EMILIN2Q9BXX0 1053 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms