RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PRAMEF14Q5SWL7 426 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 LAIR1Q6GTX8 287 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 ZNF572Q7Z3I7 529 aaPredicted RBP5.24□□□□□ -1.57
ITGB1-219ENST00000534049 KCNK18Q7Z418 384 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 XYLT1Q86Y38 959 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 DRC7Q8IY82 874 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 ATL2Q8NHH9 583 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 MDM1Q8TC05 714 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 TSPEARQ8WU66 669 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 UHRF1Q96T88 793 aaPredicted RBP5.24□□□□□ -1.57
ITGB1-219ENST00000534049 ADI1Q9BV57 179 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 REXO4Q9GZR2 422 aaKnown RBP5.24□□□□□ -1.57
ITGB1-219ENST00000534049 QRSL1Q9H0R6 528 aaKnown RBP5.24□□□□□ -1.57
ITGB1-219ENST00000534049 IKZF4Q9H2S9 585 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 LANCL2Q9NS86 450 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 C14orf119Q9NWQ9 140 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 SCOCQ9UIL1 159 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 HS3ST4Q9Y661 456 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 ATP10BO94823 1461 aa5.24□□□□□ -1.57
ITGB1-219ENST00000534049 EEA1Q15075 1411 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 FHOD3Q2V2M9 1422 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 ARHGEF40Q8TER5 1519 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 FAM171A2A8MVW0 826 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 AHRRA9YTQ3 701 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 B3GALT2O43825 422 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 PTPN7P35236 360 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 BMPR1AP36894 532 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 SCAND1P57086 179 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 NHLH2Q02577 135 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 MBNL2Q5VZF2 373 aaKnown RBP5.23□□□□□ -1.57
ITGB1-219ENST00000534049 EGFLAMQ63HQ2 1017 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 ZNF627Q7L945 461 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 AMOTL1Q8IY63 956 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 CYFIP2Q96F07 1278 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 TTPALQ9BTX7 342 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 PNNQ9H307 717 aaKnown RBP5.23□□□□□ -1.57
ITGB1-219ENST00000534049 DNAJC28Q9NX36 388 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 C11orf21Q9P2W6 132 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 CHST2Q9Y4C5 530 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 ZMYM3Q14202 1370 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 TTC37Q6PGP7 1564 aa5.23□□□□□ -1.57
ITGB1-219ENST00000534049 TMEM200CA6NKL6 621 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 ZSCAN20P17040 1043 aaPredicted RBP5.22□□□□□ -1.57
ITGB1-219ENST00000534049 NR4A1P22736 598 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 AVPR1BP47901 424 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 TERF1P54274 439 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 PER3P56645 1201 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 SLC20A2Q08357 652 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 ATXN7L2Q5T6C5 722 aaPredicted RBP5.22□□□□□ -1.57
ITGB1-219ENST00000534049 NECAB2Q7Z6G3 386 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 TRMT2AQ8IZ69 625 aaKnown RBP5.22□□□□□ -1.57
ITGB1-219ENST00000534049 RPUSD2Q8IZ73 545 aaKnown RBP5.22□□□□□ -1.57
ITGB1-219ENST00000534049 TGFBRAP1Q8WUH2 860 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 CASKIN2Q8WXE0 1202 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 PUS7LQ9H0K6 701 aaKnown RBP5.22□□□□□ -1.57
ITGB1-219ENST00000534049 AKIP1Q9NQ31 210 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 CCM2LQ9NUG4 571 aaPredicted RBP5.22□□□□□ -1.57
ITGB1-219ENST00000534049 FAM30AQ9NZY2 134 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 DMRT1Q9Y5R6 373 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 ARAP3Q8WWN8 1544 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 CD109Q6YHK3 1445 aa5.22□□□□□ -1.57
ITGB1-219ENST00000534049 HECW2Q9P2P5 1572 aa5.21□□□□□ -1.57
ITGB1-219ENST00000534049 IGSF3O75054 1194 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 PPFIA2O75334 1257 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 PRKD3O94806 890 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 GCP02774 474 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 ALOX15P16050 662 aaPredicted RBP5.21□□□□□ -1.58
ITGB1-219ENST00000534049 ADSLP30566 484 aaPredicted RBP5.21□□□□□ -1.58
ITGB1-219ENST00000534049 MCAMP43121 646 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 GPR3P46089 330 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 USP14P54578 494 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 RNASE9P60153 205 aaKnown RBP5.21□□□□□ -1.58
ITGB1-219ENST00000534049 MGAT2Q10469 447 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 TOR2AQ5JU69 321 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 MFSD14BQ5SR56 506 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 RNF187Q5TA31 235 aaPredicted RBP5.21□□□□□ -1.58
ITGB1-219ENST00000534049 ARHGEF19Q8IW93 802 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.21□□□□□ -1.58
ITGB1-219ENST00000534049 CEP95Q96GE4 821 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 SENP6Q9GZR1 1112 aaPredicted RBP5.21□□□□□ -1.58
ITGB1-219ENST00000534049 YY1AP1Q9H869 796 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 MANSC1Q9H8J5 431 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 CYP4F11Q9HBI6 524 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 SPC25Q9HBM1 224 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 TMEM140Q9NV12 185 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 PACSIN3Q9UKS6 424 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 ATP11BQ9Y2G3 1177 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 FPGT-TNNI3KV9GXZ4 949 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 ZMYM4Q5VZL5 1548 aa5.21□□□□□ -1.58
ITGB1-219ENST00000534049 CDK13Q14004 1512 aaKnown RBP5.2□□□□□ -1.58
ITGB1-219ENST00000534049 CXorf49A8MYA2 514 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-219ENST00000534049 LEFTY2O00292 366 aa5.2□□□□□ -1.58
ITGB1-219ENST00000534049 SREBF1P36956 1147 aa5.2□□□□□ -1.58
ITGB1-219ENST00000534049 MTNR1BP49286 362 aa5.2□□□□□ -1.58
ITGB1-219ENST00000534049 ERVK-21P61565 698 aa5.2□□□□□ -1.58
ITGB1-219ENST00000534049 IRX6P78412 446 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-219ENST00000534049 SRSF2Q01130 221 aaKnown RBP5.2□□□□□ -1.58
ITGB1-219ENST00000534049 KLF1Q13351 362 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-219ENST00000534049 ATP2B3Q16720 1220 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms