RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 WNK4Q96J92 1243 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 HSD3B7Q9H2F3 369 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 SUGCTQ9HAC7 445 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 RAVER2Q9HCJ3 691 aaKnown RBP6.34□□□□□ -1.39
CHKA-208ENST00000533910 BLOC1S4Q9NUP1 217 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 COL20A1Q9P218 1284 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 SUCOQ9UBS9 1254 aaKnown RBP6.34□□□□□ -1.39
CHKA-208ENST00000533910 APEX2Q9UBZ4 518 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 VAV3Q9UKW4 847 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 BECN2A8MW95 431 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 GOLGA6L19H0YKK7 550 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 MEIS1O00470 390 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 CXCL11O14625 94 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 MSH4O15457 936 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 TBX1O43435 398 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 KLRC4O43908 158 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 PEX14O75381 377 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 ADCY5O95622 1261 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 RPN1P04843 607 aaKnown RBP6.33□□□□□ -1.4
CHKA-208ENST00000533910 ALAS1P13196 640 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 IBSPP21815 317 aaPredicted RBP6.33□□□□□ -1.4
CHKA-208ENST00000533910 CASP1P29466 404 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 HOXA7P31268 230 aaPredicted RBP6.33□□□□□ -1.4
CHKA-208ENST00000533910 AFMP43652 599 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 CUL4BQ13620 913 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 MOGSQ13724 837 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 PRKG1Q13976 671 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 TMEM132BQ14DG7 1078 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 CEP55Q53EZ4 464 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 PRR16Q569H4 304 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 MUM1L1Q5H9M0 696 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 KRT79Q5XKE5 535 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 HAUS3Q68CZ6 603 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 SLC30A10Q6XR72 485 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 LBX2Q6XYB7 198 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 ARMCX6Q7L4S7 300 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 CDH24Q86UP0 819 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 PLA2G4DQ86XP0 818 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 MB21D1Q8N884 522 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 RASSF8Q8NHQ8 419 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 SYTL5Q8TDW5 730 aaPredicted RBP6.33□□□□□ -1.4
CHKA-208ENST00000533910 FBLIM1Q8WUP2 373 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 SLC5A5Q92911 643 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 CLMNQ96JQ2 1002 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 C7orf25Q9BPX7 421 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 TEX13BQ9BXU2 312 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 TRIM9Q9C026 710 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 NT5C3AQ9H0P0 336 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 MRPL18Q9H0U6 180 aaKnown RBP6.33□□□□□ -1.4
CHKA-208ENST00000533910 JADE2Q9NQC1 790 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 RNF146Q9NTX7 359 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 RMND1Q9NWS8 449 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 KLHL42Q9P2K6 505 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 PCDHA12Q9UN75 941 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 ZNF451Q9Y4E5 1061 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 ARID2Q68CP9 1835 aa6.33□□□□□ -1.4
CHKA-208ENST00000533910 ZNF236Q9UL36 1845 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 SYNRGQ9UMZ2 1314 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 A0A1W2PQU0 124 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 SMTNL1A8MU46 457 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 CBFA2T2O43439 604 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 CLEC3AO75596 197 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 PSMD10O75832 226 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 RHOBTB3O94955 611 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 NFICP08651 508 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 ZNF18P17022 549 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 ITGB5P18084 799 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 RPA1P27694 616 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 CALRP27797 417 aaKnown RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 ZNF75DP51815 510 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 RPS6P62753 249 aaKnown RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 FKBP1BP68106 108 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 PPP2R5CQ13362 524 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 COBLL1Q53SF7 1204 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 FAM209AQ5JX71 171 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 TREML2Q5T2D2 321 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 RNF187Q5TA31 235 aaPredicted RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 ZNF658Q5TYW1 1059 aaPredicted RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 WDR78Q5VTH9 848 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 SNRNP48Q6IEG0 339 aaKnown RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 XRRA1Q6P2D8 792 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 B3GNT9Q6UX72 402 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 RNF207Q6ZRF8 634 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 MOB2Q70IA6 237 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 ARMC9Q7Z3E5 817 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 KCNK18Q7Z418 384 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 KIAA0907Q7Z7F0 614 aaPredicted RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 CPXCR1Q8N123 301 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 IL31RAQ8NI17 732 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 CYP2W1Q8TAV3 490 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 ENOX1Q8TC92 643 aaKnown RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 CYB5D2Q8WUJ1 264 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 LARP4BQ92615 738 aaKnown RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 RAD54LQ92698 747 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 STAMQ92783 540 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 GJA10Q969M2 543 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 CDK5RAP3Q96JB5 506 aa6.32□□□□□ -1.4
CHKA-208ENST00000533910 UBL7Q96S82 380 aaPredicted RBP6.32□□□□□ -1.4
CHKA-208ENST00000533910 MXRA8Q9BRK3 442 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms