RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 CNNM4Q6P4Q7 775 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 ELMSAN1Q6PJG2 1045 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 ALKAL1Q6UXT8 129 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 PPFIBP1Q86W92 1011 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 CEP57Q86XR8 500 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 RIN2Q8WYP3 895 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-227ENST00000533909 CASP10Q92851 521 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 KIF12Q96FN5 646 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 PAAF1Q9BRP4 392 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 GOLGA2P5Q9HBQ8 144 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 EXOC1Q9NV70 894 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 CIZ1Q9ULV3 898 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-227ENST00000533909 BARX2Q9UMQ3 279 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-227ENST00000533909 NUB1Q9Y5A7 615 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 IRAK3Q9Y616 596 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 ATG2AQ2TAZ0 1938 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 PVALEFA0A1B0GWK0 134 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 TISP43B9A030 160 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 DLL1O00548 723 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 PODXLO00592 558 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 ACTN4O43707 911 aaKnown RBP14.56□□□□□ -0.08
CAPN1-227ENST00000533909 CLASP2O75122 1294 aaKnown RBP14.56□□□□□ -0.08
CAPN1-227ENST00000533909 TBX10O75333 385 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 PPP1R37O75864 691 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 ADH1AP07327 375 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 CASP1P29466 404 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 RPL9P32969 192 aaKnown RBP14.56□□□□□ -0.08
CAPN1-227ENST00000533909 TNFSF9P41273 254 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 ACOT2P49753 483 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 CLCNKBP51801 687 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 CASP5P51878 434 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 NDUFA8P51970 172 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 DLX2Q07687 328 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-227ENST00000533909 CUL4BQ13620 913 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 NAB2Q15742 525 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 SLC10A6Q3KNW5 377 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 XKR4Q5GH76 650 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 FAM171A1Q5VUB5 890 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 SLC39A4Q6P5W5 647 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 TAS1R1Q7RTX1 841 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 CD302Q8IX05 232 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 GRAMD1CQ8IYS0 662 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 HPS3Q969F9 1004 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 C18orf25Q96B23 403 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-227ENST00000533909 PAGE5Q96GU1 130 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 B3GALT6Q96L58 329 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 UHRF1Q96T88 793 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-227ENST00000533909 TTPALQ9BTX7 342 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 GPR62Q9BZJ7 368 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 HAPLN2Q9GZV7 340 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.56□□□□□ -0.08
CAPN1-227ENST00000533909 CITO14578 2027 aa14.56□□□□□ -0.08
CAPN1-227ENST00000533909 LACTBL1A8MY62 500 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 LDHAP00338 332 aaKnown RBP14.55□□□□□ -0.08
CAPN1-227ENST00000533909 MYL1P05976 194 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 BMP1P13497 986 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 LTBRP36941 435 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 DSG1Q02413 1049 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 SPAG1Q07617 926 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 KCNA1Q09470 495 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 SMAD4Q13485 552 aaKnown RBP14.55□□□□□ -0.08
CAPN1-227ENST00000533909 ENOX2Q16206 610 aaKnown RBP14.55□□□□□ -0.08
CAPN1-227ENST00000533909 UPP1Q16831 310 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 ZBTB41Q5SVQ8 909 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 ARMCX5Q6P1M9 558 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 PDXDC1Q6P996 788 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-227ENST00000533909 ZMAT2Q96NC0 199 aaKnown RBP14.55□□□□□ -0.08
CAPN1-227ENST00000533909 TSPAN18Q96SJ8 248 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 FAM213AQ9BRX8 229 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 STRA6Q9BX79 667 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 DZANK1Q9NVP4 752 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 DPP7Q9UHL4 492 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 CPSF3Q9UKF6 684 aaKnown RBP14.55□□□□□ -0.08
CAPN1-227ENST00000533909 UBQLN1Q9UMX0 589 aaKnown RBP14.55□□□□□ -0.08
CAPN1-227ENST00000533909 HPSEQ9Y251 543 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 HCFC2Q9Y5Z7 792 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 STYXL1Q9Y6J8 313 aa14.55□□□□□ -0.08
CAPN1-227ENST00000533909 TTC26A0AVF1 554 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 GRXCR2A6NFK2 248 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 TMEM189-UBE2V1I3L0A0 370 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 EIF3DO15371 548 aaKnown RBP eCLIP14.54□□□□□ -0.08
CAPN1-227ENST00000533909 GLP2RO95838 553 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 CNPP09543 421 aaKnown RBP14.54□□□□□ -0.08
CAPN1-227ENST00000533909 HOXB8P17481 243 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-227ENST00000533909 GARTP22102 1010 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 RBM10P98175 930 aaKnown RBP14.54□□□□□ -0.08
CAPN1-227ENST00000533909 SOX4Q06945 474 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-227ENST00000533909 TMEM132DQ14C87 1099 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 CES5AQ6NT32 575 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 KANK3Q6NY19 840 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-227ENST00000533909 HS2ST1Q7LGA3 356 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 BEST2Q8NFU1 509 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 VN1R2Q8NFZ6 395 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 SAAL1Q96ER3 474 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 KLHL5Q96PQ7 755 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 COL25A1Q9BXS0 654 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-227ENST00000533909 FGFBP2Q9BYJ0 223 aa14.54□□□□□ -0.08
CAPN1-227ENST00000533909 IKZF4Q9H2S9 585 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms